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Name : capD (SA40_0119) Accession : YP_008586766.1 Strain : Staphylococcus aureus SA40 Genome accession: NC_022443 Putative virulence/resistance : Virulence Product : capsular polysaccharide synthesis enzyme Function : - COG functional category : - COG ID : - EC number : - Position : 141358 - 142992 bp Length : 1635 bp Strand : + Note : - DNA sequence : ATGTATCATCGAGCGTGGGAATATGCCAGTGTGAGTGAATTGATATTAATTGTTAAAGCTGTGACGACATCTATCGTTAT TACGATGGTGGTCGTGACAATTGTTACAGGCAATAGACCGTTTTTTAGATTGTATTTAATCACTTGGATGATGCACTTGA TTTTAATAGGTGGCTCAAGGTTATTTTGGCGTATTTATCGGAAATACCTTGGAGGTAAGTCATTTAATAAGAAGCCAACT TTAGTTGTTGGTGCTGGCCAAGCAGGTTCAATGCTGATTAGACAAATGTTGAAAAGTGATGAAATGAAACTTGAACCGGT ATTAGCAGTCGATGATGACGAACATAAACGCAATATCACAATTACTGAGGGTGTAAAAGTCCAAGGTAAAATTGCGGATA TTCCAGAACTAGTGAGGAAATATAAGATTAAAAAAATCATCATTGCAATTCCAACCATTGGTCAAGAGCGTTTGAAAGAA ATTAATAATATTTGCCATATGGATGGCGTTGAGTTATTGAAAATGCCAAACATAGAAGACGTCATGTCTGGTGAGTTAGA AGTGAACCAGCTGAAAAAAGTTGAAGTAGAAGATTTATTAGGCAGAGATCCTGTTGAATTAGATATGGATATGATATCAA ATGAATTGACGAATAAAACTATTTTAGTTACGGGTGCAGGTGGTTCAATAGGATCAGAAATTTGTAGACAAGTTTGTAAT TTCTATCCAGAACGTATTATTCTACTTGGCCATGGTGAAAACAGTATTTATTTAATCAATCGTGAATTGCGAAATCGCTT CGGAAAAAATATTGATATTGTTCCTATTATAGCGGATGTGCAAAATAGAGCGCGTATGTTTGAAATTATGGAAATGTATA AACCATACGCAGTTTATCATGCAGCAGCACACAAGCACGTGCCGTTAATGGAAGACAACCCTGAAGAAGCAGTACGTAAT AATATTTTAGGTACGAAAAATACTGCTGAAGCTGCAAAAAATGCAGAGGTAAAGAAATTCGTTATGATTTCTACGGATAA AGCCGTTAATCCACCTAATGTCATGGGAGCTTCAAAGCGAATTGCAGAAATGATTATTCAAAGTTTAAATGATGAAACGC ATCGAACAAATTTTGTTGCAGTGAGATTTGGTAATGTACTTGGATCGAGAGGATCTGTGATTCCACTTTTCAAAAGTCAA ATTGAAGAAGGTGGGCCAGTTACTGTGACACATCCTGAAATGACACGTTACTTTATGACAATTCCTGAAGCTTCTAGACT AGTTTTGCAGGCAGGGGCATTAGCAGAAGGCGGCGAAGTATTTGTACTAGATATGGGAGAACCAGTGAAAATTGTAGATT TAGCACGTAATTTAATTAAGCTAAGTGGTAAAAAAGAAGACGACATACGCATTACTTATACAGGGATTAGACCCGGCGAA AAAATGTTTGAAGAGCTTATGAATAAAGATGAGGTTCATCCTGAACAAGTATTTGAAAAAATTTATCGTGGCAAAGTACA ACATATGAAATGTAATGAAGTTGAAGCGATTATTCAAGACATCGTCAATGACTTTAGTAAAGAAAAAATTATTAACTATG CCAATGGCAAAAAGGGAGATAATTATGTTCGATGA Protein sequence : MYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPT LVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQERLKE INNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCN FYPERIILLGHGENSIYLINRELRNRFGKNIDIVPIIADVQNRARMFEIMEMYKPYAVYHAAAHKHVPLMEDNPEEAVRN NILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTNFVAVRFGNVLGSRGSVIPLFKSQ IEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGE KMFEELMNKDEVHPEQVFEKIYRGKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-179 | 74 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-167 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_008586766.1 | capsular polysaccharide synthesis enzyme | VFG1300 | Protein | 0.0 | 99 |
