Gene Information

Name : capB (SA40_0117)
Accession : YP_008586764.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 139696 - 140382 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAAGAAGGAAAATACGACAACAACACTATTTGTGTATGAAAAACCAAAATCAACAATTAGTGAAAAGTTTCGTGG
TATACGTTCAAACATCATGTTTTCAAAAGCAAATGGTGAAGTAAAGCGCTTATTGGTTACTTCTGAAAAGCCTGGTGCAG
GTAAAAGTACAGTTGTATCGAATGTAGCGATTACTTATGCACAAGCAGGCTATAAGACGTTAGTTATTGATGGCGATATG
CGTAAGCCAACACAAAACTATATTTTTAATGAGCAAAATAATAATGGACTATCAAGCTTAATCATTGGTAGAACGACTAT
GTCAGAAGCAATTACGTCGACAGAAATTGATAATTTAGATTTACTAACAGCTGGTCCTGTACCTCCAAATCCATCTGAGT
TAATTGGGTCTGAAAGGTTCAAAGAATTAGTTGATATGTTTAATAAACGTTACGACATTATTATTGTCGATACACCGCCA
GTTAATACCGTGACTGATGCACAACTATATGCGCGTGCTATTAAAGATAGTCTGTTAGTAATTGATAGTGAAAAAAATGA
TAAAAATGAAGTTAAAAAAGCTAAAACACTTATGGAAAAAGCAGGCAGTAACATTCTAGGCGTCATTTTAAATAAGGCAA
AAGTAGATAAATCTTCTAGTTATTATCACTATTATGGAGATGAATAA

Protein sequence : 
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDM
RKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-73 63
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-62 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_008586764.1 capsular polysaccharide synthesis enzyme VFG1298 Protein 1e-101 98