Gene Information

Name : hly (SA40_1032)
Accession : YP_008587676.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Virulence
Product : alpha-hemolysin precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1128897 - 1129856 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCCATATTAATGAATCCTGTCGCTAATGCCGC
AGATTCTGATATTAATATTAAAACCGGTACTACAGATATTGGAAGCAATACTACAGTAAAAACAGGTGATTTAGTCACTT
ATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAACTGCTAGTT
ATTAGAACGAAAGGAACCATTGCTGGTCAATATAGAGTTTATAGCGAAGAAGGTGCTAACAAAAGTGGTTTAGCCTGGCC
TTCAGCCTTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCTCAAATATCTGATTACTATCCAAGAAATTCGATTG
ATACAAAAGAGTATATGAGTACTTTAACTTATGGATTCAACGGTAATGTTACTGGTGATGATACAGGAAAAATTGGTGGC
CTTATTGGTGCAAATGTTTCGATTGGTCATACACTCAAATATGTTCAACCGGATTTCAAAACAATTTTAGAGAGCCCAAC
TGATAAAAAAGTAGGCTGGAAAGTGATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGATAGAGATTCTTGGA
ACCCGGTATATGGCAATCAACTTTTCATGAAAACTAGAAATGGCTCTATGAAAGCAGCAGATAACTTCCTTGATCCTAAC
AAAGCAAGTTCTCTATTATCTTCAGGTTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGCATCCAAACA
ACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTACCAATTGCATTGGACTTCAACAAATTGGAAAGGTA
CCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence :
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLV
IRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGG
LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPN
KASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 100
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-144 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 6e-145 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hly YP_008587676.1 alpha-hemolysin precursor VFG1293 Protein 2e-145 100