Gene Information

Name : hsdM (SA957_0058)
Accession : YP_008584156.1
Strain : Staphylococcus aureus SA957
Genome accession: NC_022442
Putative virulence/resistance : Unknown
Product : type I restriction-modification system DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 67114 - 68628 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
ATGGCCACTATAGGTTTTGAAGAAAAATTATGGCAAGCTGCCGATAAATTGAGAGGAAGTATGGATGCTGCTGAGTATAA
AAATGTAGCACTAGGTTTAATCTTTTTAAAATATGTATCAGATTCTTTTGAAGAAAAGTATGAAGAATTGAAGCAGGATC
CATATGCAGATGAAGAGGACCAAGATGAATACTTAGCAGAAAACATTTTCTGGGTGCCAAAAGAAGCAAGATGGCAATAT
ATCAATGATAATGCGAAAAAACCAGAAATTGGACAAATTATTGATAAAGCAATGATTGCAATTGAAAATGAAAATGAATC
ACTCAAAGGTGTATTACCTAAAGAATATGCAAGACCTGCATTAGATAAAGAAAAATTAGGCGATATTATTGATTTATTTA
CATTTAAAGTTGGCGACACAGAGAGTCGTAAACAAGATGTGTTAGGTCGTGTGTATGAGTACTTTATTGCTAAATTCGCA
AGTGCCGAAGGTAAAAATGCTGGAGAATTCTATACCCCGTCATCAATTGTAAAGTTATTAGTTGAGATGATTGAGCCTTA
TAAAGGCCGTATTTACGATCCGTGTTGCGGTTCAGGTGGGATGTTTGTACAAAGTGAACGCTTCGTTGAGAAACATCAAG
GTCGATTAGACGATATTGCGATTTACGGACAAGAATCTAACCCTACGACTTGGAAATTAGCAAAAATGAACTTAGCGATT
CGTGGTATTGATAATGACTTAGGTGAACGAAATGCTGATACATTCCATAATGATTTACATAAAGGATTAAAAGCAGATTA
CATATTAGCCAATCCTCCTTTTAACGCAAGTGATTGGGGTCAAGAACGATTACTTGATGATTACCGTTGGCAATTTGGTA
TTCCACCAAAAGGTAATGCTAACTATGCATGGATTGAACATATGATTTCAAAATTAGCACCTAATGGTACAGCAGGATTC
GTATTAGCCAACGGATCAATGTCTACAAGCGGAAAAGATGAATTAGAAATTCGTAAAAATCTAATTGAACAAGATTTAGT
TGAATGTATTGTTACTTTACCTGGACAACTCTTTTACTCAACCCAAATACCTGTATGTCTTTGGTTCATTAGTAATAATA
AAGGTCAAAATGGTAAAAAAGAGCGTGAAAATGAAATTTTATTTATCGATGCTCGTGAAATCGGCCATATGGTATCTAGA
ACATTAAAAGAATTTTCAGATGAAGATATTCAAAAAGTAGCACAGACGTATCATGCGTGGAGAGGTACAAACGATAAACC
TTATGAAGATATAGCTGGTTTTTGTAAAGTAGCTAATTTAGAAGAAGTTAAGAATAATGAATACATTTTAACACCTGGAC
GATATGTTGGTTTAGCTGACGTTGAAGAAGATGAAGAACCTTTTGAACAAAAAATGGAACGTATTACTTCTGAATTAAGT
GAACAATTCGCAAAATCAAAAGAACTTGAAGACCAAATCCGAAAATCATTGGAGGGGTTAGGATATGGAGTATAA

Protein sequence :
MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYEELKQDPYADEEDQDEYLAENIFWVPKEARWQY
INDNAKKPEIGQIIDKAMIAIENENESLKGVLPKEYARPALDKEKLGDIIDLFTFKVGDTESRKQDVLGRVYEYFIAKFA
SAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAI
RGIDNDLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGIPPKGNANYAWIEHMISKLAPNGTAGF
VLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKGQNGKKERENEILFIDAREIGHMVSR
TLKEFSDEDIQKVAQTYHAWRGTNDKPYEDIAGFCKVANLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMERITSELS
EQFAKSKELEDQIRKSLEGLGYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 0.0 100
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 0.0 99
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 0.0 98
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 3e-128 50