|
Name : hsdR (SA957_0056) Accession : YP_008584154.1 Strain : Staphylococcus aureus SA957 Genome accession: NC_022442 Putative virulence/resistance : Unknown Product : type I restriction-modification system endonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 62720 - 65839 bp Length : 3120 bp Strand : - Note : - DNA sequence : ATGAACTTTCAATTTAATGAAGATGATTTAGAACAAGTCGCATTAGAATGGCTACAATCACTAGGCTATGACTATAAAAA AGGTAATGAGATTAGTATGACAAGTCTAACACCAGAACGTAAAAGTGATAAAGATGTTGTCCTTCATGAACGTTTAGAGA AAGCATTAAGAAAAATCAACTCAGATATCCATCCTCGTTTTATTGAAAAAGCGCTACATGAACTAACTTTAGAGAAGTCG CCCAATCTTTTAGAAAATAACCTTACCTTTCATGAAAATTTGATTAATGGTATTGAAATCGAAGACTATGATGATGAAGG ACAATCGATTGTAGAAATTGTTAAAATTATTGATTTTGAATATCCACAAAACAATGATTTTTTAGCAGTCAATCAATTAA CTATCGTTAATGGAGACTATAAAAAACGTCCCGATATTGTACTCTTTATCAATGGCTTGCCTATCGTAGTGATTGAACTT AAAAATTCAACAAATGAAACCGTGGGCGTCGAAGACGGTTATCATCAATTAGAAACGTATAAGATGCGTATTCCACAATT ATTTACGTTTAACGAAGTGCTTGTTACAAGTGATGGTATTAATACAAAGGCTGGCTCTCTAACCGCAAATTATGATCGGT TTATGACTTGGCGCAGTAAAGATGGTCAAACTGAATCATCACCAGGTTTAGCTAGCTTAGACGTACTCATTCATGGCATG TTAAATCCAGAAACATTACTTGATTTAATTCGATATTTTGTTTTATTTCAAGATGATGGCAAAGGACATATCAGTAAAAT TCTAGCAGCGTATCATCAATATTATGCCGTTAATAAAGCCGTTGACAGAGCTTTATTAGCTTCATCTGAGCAAGGTGATG GTAAAGGCGGCGTTATTTGGCATACCCAAGGGTCCGGTAAAAGTTTAACCATGGTCTTTTTCTCTGGAAAATTAATTCAA ATGCTGAATAACCCTACCTTAGTCGTCGTAACGGATCGTAATGATTTAGATAACCAACTGTACAGTACGTTTGTTAAATC AAAAGGACGTTCTGGTAAAGGATTATTAAGACAAACACCAAAACAAGCTGAAACACGTAAAGAATTAAAATCATTATTAT CTGTTGAGTCGGGTGGTATTGTATTTACAACGATGCAAAAATTTGAACCTGAACAAAACGAAACGACCATGGCTGCCCTA ACAGAACGAAAAAATGTGATTGTCATGGCAGACGAAGCTCATCGTACACAATATGGCTTTAACGCAAAATACGATGATAA AGGTGAAGGCATTAAATATGGTTATGCCAAATATTTAAGAGATGCTTTACCGAATGCAACATTCGTAGGATTTACAGGCA CACCCGTAGCTTCAACGGATAAAAATACGCAAATGGTTTTCGGAAACTATATCGATGTTTATGATATGACACAAGCCGTC GCTGATGGAAGCACCGTTAAAATTTACTATGAAAGTCGTGTAATTCCATTAAATCTACCTCAAAGTTTAGATTTAGATGA AGCGTATAATGACATTACTGAAGATCAAGAAGAGGATGTAAAACAGCGTTTAAAATCAAAATGGTCCCGTATTGAAGCTT TAGCAGGCGCAAAACCTCGTGTAGAAGCCCTAGCCAAAGATATCATCCAACACTTTGAAACACGTCAACAAGCGATGAAA GGCAAAGGAATGATTGTAACGATGAGTCGTCGAATTGCTGTTGATTTATATGATGAAATCATTCGTCTAAAACCAGAATG GCATTCAGATGATGATGATAAAGGAGTCATTAAAGTGGTAATGACAGGCTCATCTAGTGACCCAACTTCTTTCCAAAGAC ACATTGGTCCTAAAAAACGCCGTAATTTATTAGAAAAACGTATGAAAGATGTGGATGATGAGTTACAACTCGTGATTGTT CGAGATATGTGGCTGACAGGGTTTGATGTTCCTTCTATGCATACGATGTATATTGATAAACCGATGAAAGGGCATAATTT GATGCAAGCAATTGCTCGAGTTAATCGAGTGTTTAAAGATAAGCCGGGTGGTTTAATTGTCGATTATGTGGGGATTGCCG AAAGTTTAAAAGAGGCACTTAAAGAATATACAGAATCTGATCAAGCTCAAACGGCAATAGATACGGATAAAGCGGTTGAA TTGATGTTATTGAAGTATGATGTAATTCAAGATATGTTATATAATCTTGATTACTCTAAATTTAATTCAGATAAAAAATC TGAACGTTATTATACAATATCGAATACGATGGATTATGTAATTGGTTTAGGTGAAGATGAACGTCAACGTTTTATTAAAA CAGTCACAGAATTAGGGAAAGCCTTTGCTCTTTGTGCGACTGAACCTACAGCCCAAGAACTCAACGATGAGATTGCCTTC TTTAAAGCAGTTAAAGCAGGACTTGTTAAATTGTTACAACCGCCAAAAGAAGGAAAAACACGTAAAACACCTGCAGAAGT TGAAGCAGAGATTAATCAACTTGTGTCACAATCTGTTGTGACTGAAGATGTCATTGATGTTTATCAAACGCTAGGTCTTG AACAACCCGATTTATCAATCTTATCTGATGACTTTTTAAAAGATGTCGAAGGATTGAAACAGAAAAATGTGGCGGTAGAA TTATTAAATCGATTACTCAAAGGACAAGTTAAATCATTAATGAAAACGAATGCAACGGTATCTAAGCGTTTCTCTGAGAT GTTAGGAAATTCGATTAATAAATATAATAGTCGTTCCATTGAAACATCTAAAGTGATTGAAGAACTTATTCAACTCGCTA AAGATATTAAACAAGAACAACAACGAGGAAATGAATTAGGCCTGAATTCAGATGAGATTGCGTTTTACGATGCTTTAGCT TCACATGAAACAGCAAAAGAAGCCATGGGAGATAAAGAACTACGTGCGATTGCTCATGAGCTAACTAAAACAGTGAAAGA AAACATGGGTGTTGATTGGTCTAAACGTGATAGCGCAAAAGCTAAAATGCGCGTAGCTGTTAGACGATTGCTTAAAAAAT ATGGCTATCCACCAGATTTACAAAAAATGGCTGTAGAGCAGGTTGTAGAGCAAGCAGAACTTATGGCGAATAATCAATAA Protein sequence : MNFQFNEDDLEQVALEWLQSLGYDYKKGNEISMTSLTPERKSDKDVVLHERLEKALRKINSDIHPRFIEKALHELTLEKS PNLLENNLTFHENLINGIEIEDYDDEGQSIVEIVKIIDFEYPQNNDFLAVNQLTIVNGDYKKRPDIVLFINGLPIVVIEL KNSTNETVGVEDGYHQLETYKMRIPQLFTFNEVLVTSDGINTKAGSLTANYDRFMTWRSKDGQTESSPGLASLDVLIHGM LNPETLLDLIRYFVLFQDDGKGHISKILAAYHQYYAVNKAVDRALLASSEQGDGKGGVIWHTQGSGKSLTMVFFSGKLIQ MLNNPTLVVVTDRNDLDNQLYSTFVKSKGRSGKGLLRQTPKQAETRKELKSLLSVESGGIVFTTMQKFEPEQNETTMAAL TERKNVIVMADEAHRTQYGFNAKYDDKGEGIKYGYAKYLRDALPNATFVGFTGTPVASTDKNTQMVFGNYIDVYDMTQAV ADGSTVKIYYESRVIPLNLPQSLDLDEAYNDITEDQEEDVKQRLKSKWSRIEALAGAKPRVEALAKDIIQHFETRQQAMK GKGMIVTMSRRIAVDLYDEIIRLKPEWHSDDDDKGVIKVVMTGSSSDPTSFQRHIGPKKRRNLLEKRMKDVDDELQLVIV RDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTESDQAQTAIDTDKAVE LMLLKYDVIQDMLYNLDYSKFNSDKKSERYYTISNTMDYVIGLGEDERQRFIKTVTELGKAFALCATEPTAQELNDEIAF FKAVKAGLVKLLQPPKEGKTRKTPAEVEAEINQLVSQSVVTEDVIDVYQTLGLEQPDLSILSDDFLKDVEGLKQKNVAVE LLNRLLKGQVKSLMKTNATVSKRFSEMLGNSINKYNSRSIETSKVIEELIQLAKDIKQEQQRGNELGLNSDEIAFYDALA SHETAKEAMGDKELRAIAHELTKTVKENMGVDWSKRDSAKAKMRVAVRRLLKKYGYPPDLQKMAVEQVVEQAELMANNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 100 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 98 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 97 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 46 |
