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Name : CPE2_0868 (CPE2_0868) Accession : YP_008583075.1 Strain : Chlamydia pecorum W73 Genome accession: NC_022440 Putative virulence/resistance : Virulence Product : type III secretion system ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 987528 - 988829 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGACTTACCTAAACAAAGAGAAAATACATCTCCATCATTGGCAGCCCTACCGCGCGTGCGGCTTGCTATCTCGAGTGTC TGGGAATCTCCTAGAAGCACACGGGTTATCTGCATGCCTCGGAGAACTATGCAAAATCTCTTCAACACAATCTTCAGAAC TTCTTGCAGAGGTCATCGGCTTCCACAACCAGACAACCCTGCTCATGTCGCTATCTCCCTTGTATGGAGTTGCCTTAGGA ACAGAAGTTCTCCCCTTGCGTCGTCCCCCCTCTTTGCATCTTTCAGATCACCTTCTAGGCAGAGTTTTGGATGGCTTAGG GAACCCTATCGACAACCAAAAAGACCTACCAAAAACCCACCGTAAGCCGCTGATTTCCCCACCCCCTCCCCCTATGACGA GGAAACCGATCCATGAAGTCTTCCCGACAGGAATTAAGGCGATAGATGCCTGTTTAACCCTAGGAAAGGGACAACGCATT GGCGTCTTCTCAGAACCTGGGAGCGGAAAATCTTCTCTTCTCTCTTCTATTGCCTTAGGATCGAAATCCACAATCAATGT GATAGCATTAATTGGAGAGCGTGGAAGGGAAGTTCGTGAATACATAGAGCGCCATAAAGAAGCTCTAAAAAAACATCAAA CCGTGATTGTTACAGCCCCCGCACACGAAACTGCTCCTATAAAGATTATAGCGGGTCGTGTAGCCATGACCATTGCAGAA TTTTTTCGCGAGCAAGGCCACGATGTACTATTTATTATGGACTCGCTTTCCCGTTGGATCTCGGCTCTACAAGAAGTTGC CCTTGCTCGCGGAGAGACTCTCTCTTCTCACCACTATGCTGCTTCGGTATTCCATCATGTTTCTGAGTTCACAGAGCGCT CAGGAAATAGCGATCAGGGCTCCATCACAGCACTCTTGGCAATTTTGCACTATCCCGATCACCCCGATGTATTTACAGAT TATTTAAAGTCCCTTTTGGATGGGCACTTTTTCCTCTCCAACCAAGGACATGCTTTTACCTCTCCCCCCATAGATATCTT ATCTAGCCTCTCACGATCCGCGCAATCTCTCTCTCTTCCACATCACTATGCTGCAGCAGAAAAACTCCGTTCTTTACTTA AGGTATACAATGAAGCCTTAGATATTATCCGCCTAGGAGCGTATACTCCAGGACAAGATAAAGACCTTGATGAAGCTATG AAGCTAATCCCAAGCATTCAAGCGTTTCTTTCTCAACCTCTTACAAATTACTATAACTTTGATACGACCATAAAACAGTT GGAAACGTTACTTCATTCATGA Protein sequence : MTYLNKEKIHLHHWQPYRACGLLSRVSGNLLEAHGLSACLGELCKISSTQSSELLAEVIGFHNQTTLLMSLSPLYGVALG TEVLPLRRPPSLHLSDHLLGRVLDGLGNPIDNQKDLPKTHRKPLISPPPPPMTRKPIHEVFPTGIKAIDACLTLGKGQRI GVFSEPGSGKSSLLSSIALGSKSTINVIALIGERGREVREYIERHKEALKKHQTVIVTAPAHETAPIKIIAGRVAMTIAE FFREQGHDVLFIMDSLSRWISALQEVALARGETLSSHHYAASVFHHVSEFTERSGNSDQGSITALLAILHYPDHPDVFTD YLKSLLDGHFFLSNQGHAFTSPPIDILSSLSRSAQSLSLPHHYAAAEKLRSLLKVYNEALDIIRLGAYTPGQDKDLDEAM KLIPSIQAFLSQPLTNYYNFDTTIKQLETLLHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 3e-57 | 42 |
