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Name : gspE (CPE1_0906) Accession : YP_008582188.1 Strain : Chlamydia pecorum PV3056/3 Genome accession: NC_022439 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1032490 - 1033980 bp Length : 1491 bp Strand : - Note : - DNA sequence : ATGGCCGATGATCTCCTGAATTATAAGCTTTTAGACCTTTTCCCCTATACGTTTCTAAAGAAACACTGCTGTCTTCCTCT CGAAGAAGAGGGCGATGTTCTTGTAATTGCTCATGCACCGACGACCTCCCTTGTAGCTTTAGATGAAATTCGGTTGTTAT CGAAAAAGAACGTACGCTTTCTTATAAAAGAAGAAGCTGAAATCCTACAGAGTCTGCAAAAGCTTTATAGCACAAGAGGT GGAAAAGCTTCCGATATGCTGCTAACGATGGAGCAGGAAACCTCCCCCACAATGGAAGCTCAGGAAGATCTCCTTGAAAA TACGAGTTCAGCTCCTGTTGTCCGGCTGTTAAATTTGATCTTAAAAGAAGCGATCGAAGAGCGAGCTTCAGATATTCATT TTGAGCCTTCCGAAGAGGTATTGCGTATCAGATATCGTATAGATGGAGTTCTTCATGACCGCCATTCTCCTCCGTCACAT CTACGCTCTGCACTCATCACGCGGCTTAAAGTTTTAGCTAAGTTGGATATTGCGGAGCATCGCCTTCCCCAAGATGGTAG GATAAAGCTGCAGCTTGGTGGGCAGGAAGTGGATATGCGTGTCAGCACAGTGCCTGTGATTCATGGGGAAAGGGTCGTTT TGCGGATCTTAGATAAGCGAAATGTGATTTTAGATATTGCAGGGCTCTGCATGCCTGAAGCAATGGAGAGGGAATTTAAA GAAAATATTAAAGCTCCAGAAGGGATTTTGCTAGTTACGGGCCCTACGGGAAGTGGGAAAACTACGACGTTATATGGAGT GTTGCAGGAGCTCTCAGGGCCGTTTACAAACATTATGACAATCGAGGATCCTCCAGAATATAAACTCGCAGGGATCGCAC AGATCGCTGTAAAGCATAAAATCGGTCTGTCGTTTTCGCGTGGGTTACGGCATTTGTTGCGTCAAGATCCGGATATTTTA ATGGTGGGAGAAATCCGAGATCAGGAAACAGCAGAGATCGCCATACAGGCAGCTCTAACGGGACATTTCGTAGTGAGTAC CTTGCATACAAATGATGCCATCTCGGCTGTATTTCGTTTGATAGATATGGGAGTGGAGCCTTATTTGCTTTCCGCAACCC TTGTTGGAGTGGTGGCACAAAGGTTGGTAAGAAAACTTTGTCCCCATTGTAAAAAAACCTGCTCCCCAGATGAGCATGAA AAGGCGTTTCTTCTTTCCCTTAAGGAAGACCCTCATCGCCAAGTATACCATGGACAGGGATGCTCGGCGTGTTTTCATTC TGGATACAAAGGCCGACAGGGAATCTACGAGTTTTTCCGTCCAGATGCGCATCTGCGCTCAGAGATTGCTCAGAGGCAAA CATATCAGGCGTTGCGAGACCATGCCTATACCAGTGGTTTTCGTCCTTTGTTAGAGCATGGTGTTGCTTTAGCCCTTTCT GGGCAAACCTCATTATCCGAGGTTTTGAGGGTAACAAGACACTACGATTAA Protein sequence : MADDLLNYKLLDLFPYTFLKKHCCLPLEEEGDVLVIAHAPTTSLVALDEIRLLSKKNVRFLIKEEAEILQSLQKLYSTRG GKASDMLLTMEQETSPTMEAQEDLLENTSSAPVVRLLNLILKEAIEERASDIHFEPSEEVLRIRYRIDGVLHDRHSPPSH LRSALITRLKVLAKLDIAEHRLPQDGRIKLQLGGQEVDMRVSTVPVIHGERVVLRILDKRNVILDIAGLCMPEAMEREFK ENIKAPEGILLVTGPTGSGKTTTLYGVLQELSGPFTNIMTIEDPPEYKLAGIAQIAVKHKIGLSFSRGLRHLLRQDPDIL MVGEIRDQETAEIAIQAALTGHFVVSTLHTNDAISAVFRLIDMGVEPYLLSATLVGVVAQRLVRKLCPHCKKTCSPDEHE KAFLLSLKEDPHRQVYHGQGCSACFHSGYKGRQGIYEFFRPDAHLRSEIAQRQTYQALRDHAYTSGFRPLLEHGVALALS GQTSLSEVLRVTRHYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-98 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-98 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-97 | 54 |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-101 | 48 |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG2426 | Protein | 3e-77 | 48 |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG2048 | Protein | 7e-100 | 46 |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG0233 | Protein | 4e-71 | 45 |
| gspE | YP_008582188.1 | general secretion pathway protein E | VFG0112 | Protein | 2e-79 | 41 |
