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Name : CPE1_0898 (CPE1_0898) Accession : YP_008582180.1 Strain : Chlamydia pecorum PV3056/3 Genome accession: NC_022439 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 1027119 - 1027403 bp Length : 285 bp Strand : + Note : - DNA sequence : GTGTTAACTCTTGCTACAAGCTTCAAATCTATCCTGTTTGAATACTCGTACCAATCTCTCCTACTGATTCTTATTGTTTC AGCCCCTCCGATCATCCTTGCTTCCATCGTAGGGATTATGGTGGCGATTTTTCAGGCCGCAACGCAAATCCAAGAGCAAA CATTTGCTTTTGCCATTAAGCTTGTTGTTATTTTTGGAACTCTGATGATCTCTGGAGGGTGGCTCAGTACGATGATCCTA CGCTTCGCAAGTCAGATCTTCCAAAACTTTTATAAATGGAAATAA Protein sequence : MLTLATSFKSILFEYSYQSLLLILIVSAPPIILASIVGIMVAIFQAATQIQEQTFAFAIKLVVIFGTLMISGGWLSTMIL RFASQIFQNFYKWK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 9e-11 | 46 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 2e-05 | 45 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 3e-05 | 45 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 3e-05 | 45 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 3e-05 | 45 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-05 | 45 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 9e-12 | 45 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 5e-09 | 44 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 8e-09 | 44 |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 5e-09 | 44 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 8e-09 | 44 |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 5e-09 | 44 |
| unnamed | AAL06355.1 | EscS | Virulence | LEE | Protein | 4e-09 | 43 |
| escS | CAI43888.1 | EscS protein | Virulence | LEE | Protein | 1e-08 | 43 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 3e-10 | 42 |
| escS | NP_290282.1 | hypothetical protein | Virulence | LEE | Protein | 3e-08 | 42 |
| escS | AAC38370.1 | EscS | Virulence | LEE | Protein | 2e-08 | 42 |
| ECs4582 | NP_312609.1 | EscS | Virulence | LEE | Protein | 3e-08 | 42 |
| escS | AAC31527.1 | L0048 | Virulence | LEE | Protein | 2e-08 | 42 |
| escS | ACU09472.1 | hypothetical protein | Not tested | LEE | Protein | 2e-08 | 42 |
| escS | YP_003236102.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 3e-08 | 42 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-08 | 41 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-08 | 41 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-08 | 41 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 1e-08 | 41 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 5e-09 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG2132 | Protein | 1e-36 | 91 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0520 | Protein | 7e-06 | 45 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0043 | Protein | 4e-12 | 42 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0187 | Protein | 3e-07 | 42 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0826 | Protein | 8e-09 | 42 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0716 | Protein | 8e-09 | 42 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG1772 | Protein | 4e-13 | 41 |
| CPE1_0898 | YP_008582180.1 | type III secretion system protein | VFG0550 | Protein | 3e-09 | 41 |
