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Name : clpC (CPE1_0346) Accession : YP_008581658.1 Strain : Chlamydia pecorum PV3056/3 Genome accession: NC_022439 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 384088 - 386622 bp Length : 2535 bp Strand : - Note : - DNA sequence : ATGTTTGAGAAGTTTACTAATAGAGCTAAGCAAGTTATCAAATTAGCTAAAAAAGAAGCCCAGCGTTTAAATCACAACTA TCTAGGGACTGAGCATATTTTGCTAGGACTGCTAAAATTAGGCCAAGGCGTAGCTGTAAATGTCTTACGTAACCTCGGGA TAGATTTCGATATTGCTCGACAAGAAGTAGAACGCTTAATCGGCTATGGACCTGAAATCCAAGTGTACGGAGATCCTGCG CTTACAGGAAGAGTAAAAAAATCTTTTGAATCTGCAAATGAAGAAGCAGGGATTTTAGAACATAACTATGTTGGAACGGA ACATTTACTTTTAGGAATTTTAAATCAAACAGATGGTGTAGCGCTTCAAGTATTAGAAAACCTCCGCATTGATCCTAGAG ATGTCCGTAAAGAAATTCTTAAAGAGTTAGAAACTTTTAATCTTCAGCTTCCTCCTTCTTCCTCCTCCTCAAGGGGAAGC TCTTCCTCCTCCTCGAAGTCTCCTTTAGGCCATACTTTAGGCGTAGATAAGAGCGAGAAATTATCTGCATTAAAAGCTTA TGGCTATGACTTAACAGAGATGTTTCGTGAGTCTAAATTAGATCCTGTGATTGGGCGTTCTTCTGAGGTGGAAAGGTTAA TTTTGATTCTTTGCCGAAGAAGGAAAAACAACCCTGTACTCATTGGAGAAGCTGGTGTAGGGAAAACTGCCATAGTGGAA GGTTTAGCACAAAAGATTATTTCCAATGAGGTCCCAGAAGCTTTACGTAAAAAGCGTTTAATCACTTTAGATTTAGCATT GATGATTGCGGGAACAAAATACCGAGGGCAGTTTGAAGAGCGCATTAAAGCAGTAATGGATGAGGTTCGCAAGCATGGAA ACATCCTCCTCTTTATTGATGAGCTCCATACAATTGTTGGAGCTGGAGCTGCAGAAGGAGCTATTGATGCTTCAAACATC TTAAAGCCAGCATTAGCGCGAGGGGAAATTCAATGTATCGGAGCTACAACTATTGATGAGTACCGTAAGCATATAGAAAA GGACGCTGCTTTAGAGCGTCGTTTCCAGAAGATTATTGTTCAGCCTCCAAGCGTAGATGAAACTATTGAGATCCTCCGAG GTCTCAAGAAAAAATACGAAGAACACCATAATGTCTTTATTACAGAAGAAGCATTAAAGGCTGCAGCTACTCTTTCAGAC CAATATGTCCATGGGAGATTCCTTCCTGATAAAGCCATAGACCTCTTAGATGAAGCTGGTGCTCGTGTACGAGTCAATAC GATGGGCCAACCTACAGAGTTAATGAAGCTCGAAGCGGATATTGAAAATACACGAATCGCCAAAGAACAAGCAATAGGAA CTCAAGAATACGAAAAAGCAGCGAGTCTTCGTGATGAAGAGAAAAAACTCCGGGAGCGCCTGCAAACCATGAAGCTTGAG TGGGAAAACCATAAGGAAGAGCACCAGGTTCCTGTAGATGAAGAAGCTGTTGCTTCTGTGGTTTCCTTACAAACAGGTAT CCCCTCAGCGAGACTTACAGAAGCAGAAAGTGAGAAGCTGTTAAAATTAGAGCACACCCTCCAGCAAAAAATTATTGGCC AAAACGATGCAGTTTCTAGCATTTGCCGAGCAATCCGCCGTTCCAGGACAGGAATTAAAGATCCCAATCGCCCTACAGGT TCTTTCCTTTTCCTTGGTCCTACAGGGGTAGGGAAAACCTTATTAGCACAGCAAATTGCCATTGAGATGTTTGGGGGAGA AGATGCGTTAATTCAAGTGGACATGTCAGAGTACATGGAGAAATTTGCTGCGACAAAAATGATGGGCTCCCCTCCAGGGT ACGTCGGCCATGAAGAAGGTGGCCACCTAACAGAGCAGGTCCGACGTCGTCCTTACTGCGTCGTTCTCTTTGATGAAATC GAAAAGGCCCACCCCGACATTATGGATTTGATGCTTCAAATTCTAGAGCAAGGCCGCCTTACAGACTCTTTTGGACGTAA AGTAGATTTCCGTCATGCCATCATCATCATGACTTCTAACTTAGGTGCAGATCTAATTAAGAAAAGCGGGGAAATTGGCT TTGGGTTCCGCTCCCCTATGGATTACAAGGTGATCCAAGAAAAAATCGAAAATGCCGTGAAGAAGCATCTTAAGCCAGAA TTTATCAACCGTTTAGATGAAAGTGTGATTTTCCGTCCTTTAGAGAAAGATTCGCTCTCCCAAATTATTCATCTAGAAAT TAATAAGCTCGATACACGTCTGAAAAACTACCAGATGGCTTTAGATATCCCAGATTCTGTAATTTCCTTCCTTGTTACGA AAGGTCATTCTCCAGAAATGGGAGCACGCCCTTTACGTCGGGTGATCGAGCAGTACCTTGAAGATCCTCTAGCAGAATTA CTTCTTAAAGAGTCTTGCCGTCAAGAAGCGCGAAAACTCCGCGCCACACTGGTTGAAGATCGCGTTACCTTTGAAAAAGA AGAGAACGCGCATACTGAAGAAGTTTCCGTCTCTACACAAAATATGGATTCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDIARQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEAGILEHNYVGTEHLLLGILNQTDGVALQVLENLRIDPRDVRKEILKELETFNLQLPPSSSSSRGS SSSSSKSPLGHTLGVDKSEKLSALKAYGYDLTEMFRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTAIVE GLAQKIISNEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNI LKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIIVQPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAATLSD QYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTELMKLEADIENTRIAKEQAIGTQEYEKAASLRDEEKKLRERLQTMKLE WENHKEEHQVPVDEEAVASVVSLQTGIPSARLTEAESEKLLKLEHTLQQKIIGQNDAVSSICRAIRRSRTGIKDPNRPTG SFLFLGPTGVGKTLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEI EKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIKKSGEIGFGFRSPMDYKVIQEKIENAVKKHLKPE FINRLDESVIFRPLEKDSLSQIIHLEINKLDTRLKNYQMALDIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPLAEL LLKESCRQEARKLRATLVEDRVTFEKEENAHTEEVSVSTQNMDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_008581658.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 0.0 | 52 |
| clpC | YP_008581658.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 2e-147 | 50 |
