Gene Information

Name : O159_13960 (O159_13960)
Accession : YP_008580035.1
Strain : Leifsonia xyli DSM 46306
Genome accession: NC_022438
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1327091 - 1328779 bp
Length : 1689 bp
Strand : -
Note : -

DNA sequence :
ATGAACGATGTCGTCCAGATCGACAATCTGCAAGTGACGTTCTCCACCGACGCCGGCCCCGTGAAGGCTGTCGACGGTGT
CTCGCTGTCCGTGTCTCCAGGCGAGGTGCTCGCGATCGTCGGCGAGTCCGGCAGCGGCAAGACGGTCACGGCCAAGACGA
TCCTCGGCCTGCTTCCGGCGACGGCGACGGCTTCGGGCGCGGTGATCCTGCGCAGCAGGGACCGGCAGAGCGAGGCGGAC
ATCCTCTCGCTGAGCAAGCGGGAGCTGCGGGAGAGGCGCGGCACGGACGTCGCGATGGTCTTCCAGGAGCCCTCCACCGC
GCTGAACCCCGTGTACACCGTGGGCTGGCAGATCGCCGAAGGTCTGCGCGCCCACGGCAAGGTGTCGAAGAAGGCCGCGC
GCCAGAAGGCGGTCGACATCCTGCGCCGCGTCGGCATCCCGGACCCGGAGACGCGCGTCAAGCACTACCCGCACCAGTTC
TCCGGCGGGCAGAAGCAGCGCATCGTCATCGCCATGGCGCTGGTCCTGAACCCGGGGCTGATCGTCGCCGACGAGCCGAC
GACCGCGCTGGATGTGACCGTGCAAGCCGACATCCTCGACCTGCTCCGCCGCTGCCGCGACGAATTCGGCGTCGCGATCG
TGCTCATCACCCACAACATGGGTGTGGTGGCCGACCTCGCCGACCGGGTGGCCGTGATGTACCAGGGCGAACTCGTCGAA
GAAGCGGATGTGTACACGCTGTTCTCCGCTCCACAGGTCGACTACACGCGCCGGCTGCTGGCAGCCGTCCCGACGATCGG
GCAGGGCCGCATCGCGACGCAGGAGCGGGCTCTCGCGCGGGCGGAACAGCCCGAGGCGGCGCCAGTGGTGCAGGCGCGCG
ACGTGCGCGTCCAATACCCGGGGCGGCTCGGCCGACCCGGATATGTGGCGGTGGACGGTGTGAGCCTCGAAATCCGTCCG
GGCGAAGTGCTCGGACTGGTGGGCGAGTCGGGCTCCGGCAAAACGACCATCGGGCGCGCCATCGCCGGACTGAACCGCGT
CACCGGCGGGTCGCTGCAGGTGCTCGGGATCGAGCTGAACGGCGTCCGGGAACGGGAGTTCCGCCGGGTCCGCAGCGATA
TCGGCTTCGTCTTCCAGGACCCGGCTTCGAGCTTCAACCCGCTGCTGAGCATCGCGGACTGCGTCGCCGAACCGCTCGTC
GTCCACGGCAAGGCTTCGTCGCCGGCGGACGCGCGGGCGCGGGTGGACGAACTGCTGGAGGCGGTGCAGCTGCCACGCGG
CTACGGCGACCGGTTCCCGCACGAACTCTCCGGCGGCCAGCGGCAGCGCGCGAGTCTCGCCCGTGCGCTCGCGCTGGAGC
CGGCGCTCCTGATCGCGGACGAGCCGACCTCCGCGCTGGACGTGTCGGTGCAGGCGCGCGTCCTCGAGCTGTTCGCCGAT
CTGCAGCGCGAGTTCGGGTTCGCCTCCCTGTTCATCAGTCACGATCTGGCGGTCGTCGACCTGCTCGCCGACCGGATCGC
GGTGCTGCACCGCGGGAGGCTCATCGAGGAGGGGACCGGCGACCAGGTGCTGGGCAGCCCGCGCGAGGAGTACACGCAGC
GCCTGCTCGCATCCCTCCCCGTCCCGGACCCGGCCGAACAGGCAGACCGGCGGGATGCCTTGCAAGCGTTGCGCGGCGAG
AGCGCCTAA

Protein sequence :
MNDVVQIDNLQVTFSTDAGPVKAVDGVSLSVSPGEVLAIVGESGSGKTVTAKTILGLLPATATASGAVILRSRDRQSEAD
ILSLSKRELRERRGTDVAMVFQEPSTALNPVYTVGWQIAEGLRAHGKVSKKAARQKAVDILRRVGIPDPETRVKHYPHQF
SGGQKQRIVIAMALVLNPGLIVADEPTTALDVTVQADILDLLRRCRDEFGVAIVLITHNMGVVADLADRVAVMYQGELVE
EADVYTLFSAPQVDYTRRLLAAVPTIGQGRIATQERALARAEQPEAAPVVQARDVRVQYPGRLGRPGYVAVDGVSLEIRP
GEVLGLVGESGSGKTTIGRAIAGLNRVTGGSLQVLGIELNGVREREFRRVRSDIGFVFQDPASSFNPLLSIADCVAEPLV
VHGKASSPADARARVDELLEAVQLPRGYGDRFPHELSGGQRQRASLARALALEPALLIADEPTSALDVSVQARVLELFAD
LQREFGFASLFISHDLAVVDLLADRIAVLHRGRLIEEGTGDQVLGSPREEYTQRLLASLPVPDPAEQADRRDALQALRGE
SA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-63 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-89 41