Gene Information

Name : O159_12430 (O159_12430)
Accession : YP_008579894.1
Strain : Leifsonia xyli DSM 46306
Genome accession: NC_022438
Putative virulence/resistance : Virulence
Product : pyruvate kinase II
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1176427 - 1177872 bp
Length : 1446 bp
Strand : +
Note : -

DNA sequence :
GTGCGCGAGAATCACGGAGCACTGAAGAGCATGAGAAGGGCGAAAATCGTCGCGACCCTCGGGCCGGCGACCTCCAGCTA
CGACAACATCCGCGCCATCATCGACGCGGGCGTCGACGTGGCCCGGATGAATCTCAGCCACGGCAGCTACGAGGTGCATG
AGGGGGTCTACGCCAACGTTCGGAAGGCTGCCGAGGACGCCGGCAAACCGGTCGCGGTCCTGGTCGACCTCCAGGGGCCG
AAGATCCGCCTCGGCAAGTTCGAGGCCGGTCCCTACGAGCTCGCCGAGGGCGATGTCTTCAAGATCACCACCGAGGACAT
CATCGGCACCAAGGAGATCTCCTCCACCACGTTCAAGGGGCTTCCCCAGGATGTGAAGCCGGGTGACTTCCTGCTGATCG
ACGACGGCAAGGTGCGTGTGCGCGTGCTGGAGACCGACGGCACCGTCGTGACCACGGAGGTCGTCGTTGCCGGTCCTGTG
TCCAACAACAAGGGCATCAACCTGCCGGGCGTGGCGGTCAACGTGCCCGCGCTGTCCGAGAAGGACGAGGCCGACCTCCG
CTGGGGCCTGAACCTGGGCGCCGATCTCATCGCCCTCTCATTCGTGCGCAACGCGGTGGACATCGAGCGCGTACACGAGA
TCATGGCCGAAGAGGGCCGTAAGGTCCCCGTCATCGCCAAAATCGAGAAGCCGCAGGCCGTTGACGCGCTGGAGGGCATC
ATCGAGGCGTTCGACGGCATCATGGTCGCTCGTGGCGACCTGGGCGTCGAACTGCCGCTGGAGGCGGTGCCGATCGTGCA
GAAGCGCGCGGTCGAGCTCGCCCGCCGTGCGGCCAAGCCGGTCATCGTCGCCACGCAGATGCTGGAGTCGATGATCTCCA
GCCCGGTTCCGACCCGCGCCGAGACCTCCGACGTCGCGAACGCCGTCCTCGACGGTGCGGACGCGGTCATGCTCTCGGGG
GAGACCAGCGTCGGCGAATACCCGAAGATCACCGTTCAGACGATGGCGAAGATCGTGAAGTCCACCGAAGAGCACGGTCT
CGACCGGATCGCCCCGCTCGGAACCAAGCCACGCACGCAGTCCGGCGCGATCACCCTGGCCGCGACCGATGTGGCGGACT
TCGTCGAGGCCAAGTACCTCTGCGTGTTCACGGAGTCCGGCGAGTCGGCCCGTCGCATGGCGCGTCTGCGCAGCAAGATC
CGGATCCTCGCCTTCACGCCGGAGGAGTCGACCTGTCGCAAGATGGCGCTCTATTGGGGTGTGGAGTCCTTCGTGGTCGA
CCGGGTCACCCACACCGACCAGATGGTCGCGCAGGTGGACGAGGCGCTGAAGTCCACGGGCCGTGCGGAGAACGGCGACA
AGGTGGTCATCATCTCCGGCTCTCCTCCCGGGATTCCCGGCACCACCAACGACATCCGCGTACACCGGGTCGGCGACGTC
CTGTAG

Protein sequence :
MRENHGALKSMRRAKIVATLGPATSSYDNIRAIIDAGVDVARMNLSHGSYEVHEGVYANVRKAAEDAGKPVAVLVDLQGP
KIRLGKFEAGPYELAEGDVFKITTEDIIGTKEISSTTFKGLPQDVKPGDFLLIDDGKVRVRVLETDGTVVTTEVVVAGPV
SNNKGINLPGVAVNVPALSEKDEADLRWGLNLGADLIALSFVRNAVDIERVHEIMAEEGRKVPVIAKIEKPQAVDALEGI
IEAFDGIMVARGDLGVELPLEAVPIVQKRAVELARRAAKPVIVATQMLESMISSPVPTRAETSDVANAVLDGADAVMLSG
ETSVGEYPKITVQTMAKIVKSTEEHGLDRIAPLGTKPRTQSGAITLAATDVADFVEAKYLCVFTESGESARRMARLRSKI
RILAFTPEESTCRKMALYWGVESFVVDRVTHTDQMVAQVDEALKSTGRAENGDKVVIISGSPPGIPGTTNDIRVHRVGDV
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-63 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-64 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-64 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-64 41
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O159_12430 YP_008579894.1 pyruvate kinase II VFG0479 Protein 3e-64 41