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Name : gspE (DGI_4004) Accession : YP_008578739.1 Strain : Genome accession: NC_022436 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4843 - 6291 bp Length : 1449 bp Strand : + Note : - DNA sequence : GTGCGGACGTATCTTTCCTTCCCGGATCGCAACAACTTCGTGCCCGTGGCCCTGGATGCCCAGGGCCTGCGCATCTGGAT CCTGACGCCCGCGGCCCTGCCCCTGGCCGATCATCTGGCCTGGCGGCTGCAACTGCCCTCCCGGGTGGAGCTGGCGCAGG AGGACCGCTTCTATCGCATCCTGGAACAGGCCCTGGCGCTTTGGGAGCAGGAGCAGGAAGAGGACGCCCAGCGCGACCCC CAACAGGCCGATGACGAAGAGGAAAATCAGGAGCTTATCGGCTGGTCCCATGAGGATGCGCCTATCGTCCGGCTGGTGAA CAAGACCCTCAAGCAGGCCATTTCCCAGGGCGCAAGCGACATCCACCTGCAGGGCGGCCGCGGGGATTTTGAAGTCCGGT TCCGTCTGGATGGCGAGCTGCGCACCGTGCGCCGGCTGGCCAAGGCCCTGCAGCCCACGGTGGTTGCGCGCATCAAGGTC ATGGCCGATCTGGACGTGGCCGAGACCCGCGCCCCCCAGGACGGCCGTATCCAGGTGCGTTTGGCCAAGCGGGATGTGGA CATCCGCGTGTCCGTCATCCCCACCCTGAACGGCGAAAAGGCCGTGCTGCGCATCCTGGACCGCTCCAAGAATATCCTGT CGTTGCCTGAACTGGGCTTCGAGGGGGAGGATCTGGACGCCTTCCGCCGCATCATCAAGGCGCCCTACGGCATTCTGCTC GTCACCGGCCCCACGGGCAGCGGCAAAACCACCACCCTGTATGCTGCGCTCACGGAAATCATCGACGAGACAAAAAATAT TCTCACCGTGGAAGATCCCGTGGAATACCACCTGGAAGGCGTGAATCAGGTACAGGTGAACCGGGCTGCAGGCGTGACGT TCTCCACCATCATCCGGTCCTTTCTGCGCCAGGATCCGGATATCATCCTGGTGGGAGAGATCCGGGACGAGGAGACGGCC AGCACGGCCATTCAGGCATCCCTGACGGGGCATCTGGTCCTTTCCACCCTGCACACCAACGACGCCCCCACGGCCGTGAC CCGGCTGCTGGAAATGAACGTGGAACCCTTCCTGCTGGCCTCCTCCATGGTGCTGGCCATGGCGCAGCGGCTGGTGCGGG TGCTCTGCCCTGCCTGCCGCGAAACCGTGCCCCTGCCCCAGGCCACGCAACTGCTGCTGCCCGATGTGGGCGCGCGCCTG CTCACCCAGCAGCACGGCCGCGGCTGCGGGCAGTGCTACCACACCGGCTTTGCCGGCCGGCGGGGGATCTTCGAGCTGCT GCCCATTGACGAAGCCGTGCGCAGCCTCATCATTGCCCGCGCCTCCATCGACGCCTTCCACCAGCACCGCAGGGACCGCG GCCTGCGCACCATGTGGGAACACGGGCTGACCCTGGTGGAACAGGGCATCACCACCGTGGAAGAAGTGCTCCGCGTGACC CGGATGTGA Protein sequence : MRTYLSFPDRNNFVPVALDAQGLRIWILTPAALPLADHLAWRLQLPSRVELAQEDRFYRILEQALALWEQEQEEDAQRDP QQADDEEENQELIGWSHEDAPIVRLVNKTLKQAISQGASDIHLQGGRGDFEVRFRLDGELRTVRRLAKALQPTVVARIKV MADLDVAETRAPQDGRIQVRLAKRDVDIRVSVIPTLNGEKAVLRILDRSKNILSLPELGFEGEDLDAFRRIIKAPYGILL VTGPTGSGKTTTLYAALTEIIDETKNILTVEDPVEYHLEGVNQVQVNRAAGVTFSTIIRSFLRQDPDIILVGEIRDEETA STAIQASLTGHLVLSTLHTNDAPTAVTRLLEMNVEPFLLASSMVLAMAQRLVRVLCPACRETVPLPQATQLLLPDVGARL LTQQHGRGCGQCYHTGFAGRRGIFELLPIDEAVRSLIIARASIDAFHQHRRDRGLRTMWEHGLTLVEQGITTVEEVLRVT RM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-87 | 49 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-87 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_008578739.1 | type II secretion system protein E | VFG0182 | Protein | 3e-94 | 54 |
| gspE | YP_008578739.1 | type II secretion system protein E | VFG2048 | Protein | 3e-88 | 49 |
| gspE | YP_008578739.1 | type II secretion system protein E | VFG1876 | Protein | 5e-83 | 49 |
| gspE | YP_008578739.1 | type II secretion system protein E | VFG2426 | Protein | 1e-74 | 46 |
| gspE | YP_008578739.1 | type II secretion system protein E | VFG0112 | Protein | 1e-76 | 45 |
