Gene Information

Name : ECOPMV1_pHUSEC411like00096 (ECOPMV1_pHUSEC411like00096)
Accession : YP_008574648.1
Strain :
Genome accession: NC_022371
Putative virulence/resistance : Virulence
Product : invasion protein IagB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 84488 - 84973 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence :
ATGAACAGGTTATTTATCCTGACAGTGATTTTTTCACTGTTATGCTCACTTCCTTCCGCACAGGCATCCCCACAGGACAA
ACAATATGATCGTTGTTTTATTACCGCCGGAAAACGTTATTCCATTGATCCAGGATTACTCAAAATTATTGCCCGCAGGG
AAAGCAGTCTGAATCCCCGGGCCATTAATCATAACAGGAATGACAGAGGAAAAATTATCAGTACCGATTACGGGATAATG
CAGATTAACTCCACACATATTCCCGGGCTGAAAAAAATGGGCATTATCCGGAGTGAGAAAGATCTGTTGAATAATGTCTG
CCTGAATATTCAGACCGGAGCATGGATCCTCGCCCGGCATTTTCAGCGATGCGGCGTAAACTGGGAATGCCTCGGCAGTT
ATAACGCCGGCTTCAGTAAAAGTAACACTCACCGCCGGATGAAATACGCCCGGCAGATTTACAGCGCTTACATGCAGGGA
CGTTAG

Protein sequence :
MNRLFILTVIFSLLCSLPSAQASPQDKQYDRCFITAGKRYSIDPGLLKIIARRESSLNPRAINHNRNDRGKIISTDYGIM
QINSTHIPGLKKMGIIRSEKDLLNNVCLNIQTGAWILARHFQRCGVNWECLGSYNAGFSKSNTHRRMKYARQIYSAYMQG
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 2e-31 56
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 2e-31 56
pilT AAC98888.1 PilT Virulence SPI-7 Protein 1e-31 56
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 7e-30 54
unnamed AAK26704.1 unknown Not tested LEE Protein 5e-16 43
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 7e-16 43
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 7e-16 43
unnamed AAL06358.1 unknown Not tested LEE Protein 3e-16 43
unnamed AAL57531.1 unknown Not tested LEE Protein 4e-16 43
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 4e-16 43
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 4e-16 43
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 2e-18 43
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 2e-18 43
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 4e-18 43
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 4e-18 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-15 42
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 7e-15 42
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 3e-15 41
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 3e-15 41
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-15 41
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOPMV1_pHUSEC411like00096 YP_008574648.1 invasion protein IagB VFG0539 Protein 1e-18 43
ECOPMV1_pHUSEC411like00096 YP_008574648.1 invasion protein IagB VFG0719 Protein 3e-15 42
ECOPMV1_pHUSEC411like00096 YP_008574648.1 invasion protein IagB VFG0823 Protein 1e-15 41