|
Name : ribD (ECOPMV1_00400) Accession : YP_008570333.1 Strain : Escherichia coli PMV-1 Genome accession: NC_022370 Putative virulence/resistance : Unknown Product : Riboflavin biosynthesis protein RibD Function : - COG functional category : - COG ID : - EC number : - Position : 436669 - 437772 bp Length : 1104 bp Strand : + Note : - DNA sequence : GTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGT CGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCATCAACGCGCGGGTGAACCGCATGCCGAGGTAC AGGCGTTGCGCATGGCCGGCGAAAAAGCCAAAGGCGCAACGGCGTATGTCACACTCGAACCCTGTAGCCATCATGGTCGT ACGCCACCGTGTTGTGATGCATTAATTGCTGCGGGCGTGGCGCGCGTGGTTGCTGCAATGCAAGACCCCAATCCGCAGGT CGCTGGACGTGGACTTTACCGTTTGCAACAGGCTGGCATTGACGTCAGCCACGGGCTGATGATGAGTGAAGCTGAGCAAT TGAATAAAGGCTTTCTCAAGCGGATGCGCACCGGCTTTCCTTATATTCAGTTAAAACTTGGCGCATCGCTTGATGGTCGC ACGGCGATGGCGAGTGGCGAAAGCCAGTGGATCACTTCACCTCAGGCGCGACGCGACGTACAACGACTGCGCGCGCAAAG TCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCAGCCTTAACAGTGCGTTGGTCTGAACTGGATGAAC AAACTCAGGGGCTCTACCCGCAACAAAATCTCCGTCAGCCAGTACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCG GAACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGT GCGTACCTTGCTGATTCCAGAGCATAAAGGTCACCTGGATCTGGTTGTACTAATGATGCAACTGGGTAAACAGCAGATTA ACAGCATCTGGGTGGAAGCGGGGCCAACGCTCGCTGGCGCATTGCTACAGGCGGGTTTAGTCGATGAGCTGATTGTCTAT ATCGCACCTAAACTATTAGGCAACGACGCCCGTGGATTATGCACGCTGCCAGGGCTTGAGAAATTAGCCGACGCTCCCCA ATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGA Protein sequence : MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVQALRMAGEKAKGATAYVTLEPCSHHGR TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQGLYPQQNLRQPVRIVIDSQNRVTP EHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVY IAPKLLGNDARGLCTLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 5e-65 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 5e-65 | 48 |
