Gene Information

Name : fimC_2 (ECOPMV1_03742)
Accession : YP_008573495.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : Chaperone protein fimC precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3826211 - 3826963 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATGTATTATTGGAAATAAAAAATGGGTTTGTGGATTCAGGGATGAATTAAAAGTATCACAAAATATTATACGCTC
AGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCGGGTTTGGCCTTGGCGTAACGCGATTGA
TTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGACAACACCAGTTATTTAATTCAATCATGG
GTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCCCCTCTTTATGTTGCCAACGCGTAAAGA
AGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTGAAACTTTGTATTGGATGAATGTTAAAG
CAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCATTACAAAACAAAATCAAGCTATTTTAT
CGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTTTAAGTATGAGGGAAAACAACTAAAAGT
TATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGAGTAAATTGCCCAATATGTTTGTACCAC
CGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACTTATCAAACAATTAATGACTTTGGCGCT
ACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence : 
MKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGDNTSYLIQSW
VDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLALQNKIKLFY
RPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEITYQTINDFGA
TTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC_2 YP_008573495.1 Chaperone protein fimC precursor VFG0911 Protein 1e-45 48
fimC_2 YP_008573495.1 Chaperone protein fimC precursor VFG1644 Protein 2e-45 47
fimC_2 YP_008573495.1 Chaperone protein fimC precursor VFG0875 Protein 7e-50 46
fimC_2 YP_008573495.1 Chaperone protein fimC precursor VFG0445 Protein 4e-48 45
fimC_2 YP_008573495.1 Chaperone protein fimC precursor VFG0455 Protein 4e-37 41