Gene Information

Name : basR_1 (ECOPMV1_03331)
Accession : YP_008573104.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3429418 - 3430077 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGT
CGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTATATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCT
TACCGGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCG
CGCGATGCGCTGGCGGAACGTGTAGAAGGGCTGCGTCTGGGAGCTGACGATTATCTGTGTAAACCTTTTGCGTTGATAGA
AGTCGCCGCCAGGCTGGAAGCTCTGATGCGCCGAACCAACGGCCAGGCCAGCAACGAGCTGCGCCACGGCAACGTCATGC
TCGACCCCGGCAAACGTATCGCCACGCTGGCTGGCGAACCCTTAACGCTGAAACCAAAAGAATTTGCCCTGCTGGAATTA
CTGATGCGTAACGCTGGTCGGGTACTGCCGCGCAAACTGATTGAAGAGAAACTGTATACCTGGGACGAAGAGGTCACCAG
TAATGCCGTTGAAGTGCATGTGCATCATCTGCGACGCAAACTCGGCAGTGATTTTATTCGTACCGTGCATGGTATTGGCT
ACACATTAGGTGAGAAATGA

Protein sequence : 
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0487 Protein 4e-40 44
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0638 Protein 6e-31 44
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0083 Protein 1e-36 43
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0347 Protein 9e-34 42
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR NC_002516.2.879194.p Protein 8e-31 41
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0308 Protein 2e-36 41
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0197 Protein 4e-36 41
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR BAC0111 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR VFG0473 Protein 2e-40 47
basR_1 YP_008573104.1 Transcriptional regulatory protein BasR VFG1390 Protein 2e-32 42