Gene Information

Name : ECOPMV1_03076 (ECOPMV1_03076)
Accession : YP_008572857.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3145445 - 3146983 bp
Length : 1539 bp
Strand : +
Note : Uncharacterized protein conserved in bacteria

DNA sequence :
ATGTCTGTACAACAAGAACATTCCACCTCTGAAACTGCAACACTCACCACCACTGAGTCCGGCGGCGTTTATCAGTCCCT
GTTCGATAAAATTAATTTAACCCCGGTCTCTTCCATTCAGGAAATAGATTTATGGCAAAACAGCGAAACGCTGGCTGATG
CCTCACCCGATGAGCGCGTGACAGCAGCGATTCACGTTCTGCTTTCCTGTCTGGCGAAATCAGGCGAGGACGTGGTTAAG
CTCGACAAGAGCCTGCTGGATTTTCATATCGACGATCTGGATCAGAAAATCAGTAAACAGCTTGATGCGGTCATGCACCA
CCCTGAATTCCAGAAAGTCGAGTCGCTGTGGCGTGGTACATGGTTCGTCGTACAGCGCACTGATTTTCGCAAAAATGTCA
GAATTGAATTGCTGGATATCAGCAAAGAGCATCTGCGTCAGGATTTCGACGACTCCCCGGAAATCATTCAGAGCGGTTTA
TATCGTCATACATACATTCAGGAGTACGATACGCCGGGTGGCGAACCTGTTGCCTCATTAATTTCCAGCTATGAATTTGA
TAACAGCCCGCAGGATATTGCCCTGCTGCGCAATATTTCCAGAGTGTCTGCCGCTTCCCATATGCCTTTTATCGGTTCCG
TCGGACCGAAATTCTTCCTTAAAAATTCGATGGAAGAAGTCGCCGCGATTAAAGATATCGGCAACTACTTTGACCGCGCA
GAATATATTAAATGGAAGTCGTTCCGCGATACGGATGACAGCCGCTATGTGGGATTAGTGATGCCGCGAGTGCTGGGCCG
TCTGCCCTATGGGCCGGACACGGTGCCGGTACGCAGCTTTAACTATGTGGAAGAAGTCAAAGGCCCGGATCACGAAAAGT
ACCTGTGGACAAACGCCTCGTTCGCCTTTGCCGCCAATATGGTGAAGAGCTTTGTGAATAATGGCTGGTGTGTGCAGATC
CGTGGTCCACAGGCAGGTGGCGCAGTAGCCGATCTGCCCATCCATCTTTACGATCTCGGCACCGGCAATCAGGTCAAAAT
TCCGTCCGAAGTGATGATCCCGGAAACCCGCGAATTTGAATTTGCCAACCTTGGCTTTATTCCGCTCTCTTATTATAAGA
ATCGCGATTACGCCTGCTTCTTCTCGGCAAACTCCGCCCAGAAACCGGCGTTGTATGATACCGCTGACGCCACCGCCAAC
AGCCGTATTAACGCCCGTCTGCCTTACATCTTCCTGCTGTCCCGCATTGCGCATTACCTGAAAATCATTCAGCGCGAGAA
TATCGGTACCACCAAAGACCGCCGCGTACTGGAACTGGAACTGAACACCTGGATCCGCACACTGGTGACGGAGATGACCG
ATCCGGGTGATGAACTGCAGGCGTCTCACCCGCTGCGCGACGGCAAGGTTATCGTGGAAGATATTGAGGACAATCCGGGC
TTCTTCCGCGTCAGACTCTTTGCCGTGCCGCATTTCCAGATTGAAGGGATGGATATCAACCTTTCTCTGGTTTCCCAGAT
GCCGAAAGCGAAAGCCTGA

Protein sequence :
MSVQQEHSTSETATLTTTESGGVYQSLFDKINLTPVSSIQEIDLWQNSETLADASPDERVTAAIHVLLSCLAKSGEDVVK
LDKSLLDFHIDDLDQKISKQLDAVMHHPEFQKVESLWRGTWFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGL
YRHTYIQEYDTPGGEPVASLISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSMEEVAAIKDIGNYFDRA
EYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNASFAFAANMVKSFVNNGWCVQI
RGPQAGGAVADLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATAN
SRINARLPYIFLLSRIAHYLKIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPG
FFRVRLFAVPHFQIEGMDINLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-98 43
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-98 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOPMV1_03076 YP_008572857.1 hypothetical protein VFG2093 Protein 9e-104 44
ECOPMV1_03076 YP_008572857.1 hypothetical protein VFG2475 Protein 9e-108 44
ECOPMV1_03076 YP_008572857.1 hypothetical protein VFG2070 Protein 2e-86 42