Gene Information

Name : ECOPMV1_02119 (ECOPMV1_02119)
Accession : YP_008571953.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : ParB-like nuclease domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2178928 - 2179572 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence :
ATGGGGGATTCTGTGACACCTGAGGTGGAAGTATTGAGCAACATGATTCGACAGTACTTCAGTCAGGAACGATCTGAAGA
AGAGACCATACGAGCCCTTAATCATCTGCGCAGGGTGTTGCATGAGGTCAGCCCTTTTGCACAGGAGCCTGTGGACTGTG
TGTTGTGGGTGAAAGCGGATGAGGTGGTGGCCAACGATTACAATCCCAATGTCATGTCTTCCAGTGAAAAAAAACTGCTT
AAACATTCACTGGAGCAGGATGGATTCACGCAGCCTGTGGTGGTTTCGGAAGAGAAGGAGCATTATCTGGTCGTGGATGG
TTTTCATCGTCAGTTGCTGGGCAGGAAAGCGGATACGAGAAAACGTCTGAAGGGCCGGCTGCCAGTGACCTGTATTAATC
CGGAAAGAAAGGGACAGGCATCACGTATTGCCGCAACCATACGGCATAACCGTGCCAGGGGAAAACACCAGATAACGTCA
ATGTCTGACATTGTCAGGGACCTTTCGCGTCTGGGCTGGACAGATGAGCGTATTGGCACAGAGTTGGGCATGGACCAGGA
TGAAGTGCTGAGGCTGAAACAGATTAGCGGGCTGACAGAGCTGTTTCAGGAAGAGAATTTCAGCCCTTCATGGACGGTTC
GTTGA

Protein sequence :
MGDSVTPEVEVLSNMIRQYFSQERSEEETIRALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMSSSEKKLL
KHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGRKADTRKRLKGRLPVTCINPERKGQASRIAATIRHNRARGKHQITS
MSDIVRDLSRLGWTDERIGTELGMDQDEVLRLKQISGLTELFQEENFSPSWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-90 99
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-84 91
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-84 91
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-83 90
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-83 90
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-69 90
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-69 90
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-69 90
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-70 78
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 3e-71 77
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 1e-25 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 1e-26 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-26 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOPMV1_02119 YP_008571953.1 ParB-like nuclease domain protein VFG1505 Protein 6e-91 99