Gene Information

Name : ECOPMV1_01100 (ECOPMV1_01100)
Accession : YP_008570984.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1146367 - 1147188 bp
Length : 822 bp
Strand : +
Note : Domain of unknown function (DUF932)

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATGCTGCAAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCA
CTATGTTCCCAGTATTTTCGGTAAAGACCGGCATACTTCCCGCAGTAAACGGTATGCGTACATTCCCACCATCACCGTGC
TGGAAAGTCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCTGTGTGCGCGACCCGGGCCGCCGGGGATAC
ACAAAACACATGCTGCGCCTGCGCCGTAACGGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCA
TGACGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTC
TGGGGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTT
GACCGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGC
ACTGACTTACCGTTATGGTGACGAACATCGGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACG
GTAAGGACCTGTGGAGTACTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGA
AAACGTATCCACACCCGTGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTAATGGCAGAAAC
GCTGCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYAANQIRRDRPLTHEELMHYVPSIFGKDRHTSRSKRYAYIPTITVLESLQREGFQPFFACQTCVRDPGRRGY
TKHMLRLRRNGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVF
DRIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHRPVTTADILTPRRREDYGKDLWSTYQTIQENMLKGGISGRSAKG
KRIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-117 98
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-116 96
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-116 96
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-116 96
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 4e-114 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 5e-113 94
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 4e-114 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-111 91
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-108 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-108 91
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-110 91
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-111 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 4e-107 90
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-106 89
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-108 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-71 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOPMV1_01100 YP_008570984.1 hypothetical protein VFG1676 Protein 3e-113 94
ECOPMV1_01100 YP_008570984.1 hypothetical protein VFG0658 Protein 2e-114 94
ECOPMV1_01100 YP_008570984.1 hypothetical protein VFG1526 Protein 2e-107 90
ECOPMV1_01100 YP_008570984.1 hypothetical protein VFG1615 Protein 3e-106 89