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Name : fimD_1 (ECOPMV1_01072) Accession : YP_008570958.1 Strain : Escherichia coli PMV-1 Genome accession: NC_022370 Putative virulence/resistance : Virulence Product : Outer membrane usher protein fimD precursor Function : - COG functional category : - COG ID : - EC number : - Position : 1110849 - 1113479 bp Length : 2631 bp Strand : + Note : - DNA sequence : ATGTTTTCCGGAGATGGCGGACAACTCCTGTCTGATAAATCACTGACCGGCTCTGCTGGCGGGGGTAATAACAGAATGAA ATTTAATATACTGCCGCTGGCATTTTTTATCGGGATAATTGTTTCTCCGGCCCGGGCTGAGCTCTATTTTAACCCGCGTT TTCTGTCTGATGACCCGGATGCGGTTGCGGACCTGTCTGCATTTACACAGGGGCAGGAGCTTCCGCCCGGTGTGTACCGG GTGGATATTTATCTGAATGATACGTATATCTCAACCCGTGACGTGCAGTTTCAGATGAGTCAGGACGGGAAGCAACTTGC CCCCTGCCTGAGTCCGGAGCATATGAGTGCGATGGGGGTAAACCGTTATGCCGTGCCGGGTATGGAGAGACTGCCGGCTG ACACCTGCACATCACTGAATTCCATGATTCAGGGTGCCACATTCCGGTTTGATGTCGGGCAGCAGCGATTGTACCTGACC GTTCCTCAGTTATATATGAGTAATCAGGCCCGTGGTTATATTGCGCCGGAATACTGGGATAACGGAATTACAGCGGCATT GCTGAATTATGACTTCAGTGGTAATCGGGTGCGCGACAGCTATGGTGGCACCAGCGATTATGCCTATCTGAATCTGAAAA CAGGACTGAATATCGGGAGCTGGCGTCTTCGGGACAACACCAGCTGGAGTTACAGTGCCGGAAAGGGGTACAGCCAGAAT AACTGGCAGCACATTAACACCTGGCTGGAGCGGGATATAGTTCCCCTGCGCTCCCGTCTGACGATGGGGGACAGTTATAC CCGGGGGGATATTTTTGACGGTGTAAATTTCAGGGGTATTCAACTGGCCTCTGATGACAATATGGTTCCGGACAGCCAGA GAGGGTATGCACCGACAATTCACGGTATTTCCCGGGGAACATCCCGGATTAGTATCCGCCAGAACGGGTATGAAATTTAC CAGAGTACGCTACCTCCAGGCCCGTTCGAGATAAACGATATTTATCCGGCCGGGAGTGGAGGTGACTTACAGGTAACCCT GCAGGAAGCTGATGGCAGTGTACAGCGATTTAATGTGCCATGGTCTTCGGTGCCTGTACTGCAACGTGAAGGGCATCTGA AATATGCTCTCAGTGCCGGAGAGTTTCGCAGTGGCGGACATCAGCAGGATAATCCCCGTTTTGCTGAAGGAACGCTGAAG TATGGTCTGCCGGCAGGCTGGACGGTGTATGGAGGAGCCTGGATAGCTGAACGCTACCGTGCCTTCAATCTGGGGATGGG TAAAAACATGGGCTGGCTGGGCGCTGTTTCACTGGATGCCACCCGTGCGAATGCCCGGTTACCGGATGAAAGCCGGCATG ACGGTCAGTCATATCGTTTTCTGTATAACAAGTCACTGACGGAAACAGGGACAAATATCCAGTTAATCGGATACCGCTAC TCCACACGGGGCTATTTCAGCTTTGCTGATACCGCCTGGAAGAAAATGAGTGGTTACAGTGTTCTTACCCAGGACGGAGT GATACAGATACAGCCGAAGTATACGGATTACTACAATCTGGCTTACAACAAGCGGGGAAGGGTGCAGGTGAGTATCAGCC AGCAGACGGGGGAATCGTCAACGTTGTATCTGAGTGGCAGCCACCAGAGTTACTGGGGAACGGACAGGACGGACCGTCAG CTTAATGCTGGCTTTAACTCATCTGTGAATGACATCAGCTGGTCCCTGAACTACAGCCTGTCCCGGAATGCATGGCAACA TGAAACTGACCGGATACTGTCATTTGATGTCAGCATTCCGTTCAGCCACTGGATGCGTTCGGACAGCACATCTGCATGGA GAAACGCCAGTGCCCGTTACAGTCAGACCCTGGAGGCTCACGGACAGGCTGCCAGTACAGCAGGGCTGTATGGCACATCG CTGGGGGACAATAATCTGGGATACAGCATCCAGAGTGGTTATACCCGGGGAGGGTATGAGGGGAGCAGTAAAACAGGATA TGCCTCTCTGAATTACAGAGGGGGATACGGTAATGCCAGTGCAGGATACAGTCACAGTGGGGGTTACCGGCAACTGTATT ATGGGCTGAGTGGCGGTATTCTGGCACATGCCAATGGTCTGACACTGAGCCAGCCTCTGGGAGATACGCTGATTCTTGTC CGTGCACCAGGTGCATCTGATACGCGCATTGAAAACCAGACGGGGGTGTCTACAGACTGGAGGGGGTATGCTGTACTGCC TTATGCAACAGACTATCGTGAAAACCGGGTGGCACTGGATACCAACACCCTTGCAGATAATGTTGATATAGAGAATACCG TGGTCAGCGTCGTGCCCACGCATGGTGCCGTTGTGCGGGCTGACTATAAAACCCGTGTGGGTGTGAAAGTGCTGATGACG CTGATGAGAAACGGGAAAGCAGTTCCTTTTGGCTCTGTCGTTACGGCCAGAAATGGGGGGAGCAGTATCGCCGGAGAGAA TGGTCAGGTTTATCTGAGCGGAATGCCTCTGTCAGGACAGGTTAGTGTGAAATGGGGGAGTCAGACCACGGACCAGTGTA CTGCAGATTATAAATTACCGAAGGAAAGCGCCGGACAGATATTAAGTCATGTCACGGTTAGTTGCAGGTAA Protein sequence : MFSGDGGQLLSDKSLTGSAGGGNNRMKFNILPLAFFIGIIVSPARAELYFNPRFLSDDPDAVADLSAFTQGQELPPGVYR VDIYLNDTYISTRDVQFQMSQDGKQLAPCLSPEHMSAMGVNRYAVPGMERLPADTCTSLNSMIQGATFRFDVGQQRLYLT VPQLYMSNQARGYIAPEYWDNGITAALLNYDFSGNRVRDSYGGTSDYAYLNLKTGLNIGSWRLRDNTSWSYSAGKGYSQN NWQHINTWLERDIVPLRSRLTMGDSYTRGDIFDGVNFRGIQLASDDNMVPDSQRGYAPTIHGISRGTSRISIRQNGYEIY QSTLPPGPFEINDIYPAGSGGDLQVTLQEADGSVQRFNVPWSSVPVLQREGHLKYALSAGEFRSGGHQQDNPRFAEGTLK YGLPAGWTVYGGAWIAERYRAFNLGMGKNMGWLGAVSLDATRANARLPDESRHDGQSYRFLYNKSLTETGTNIQLIGYRY STRGYFSFADTAWKKMSGYSVLTQDGVIQIQPKYTDYYNLAYNKRGRVQVSISQQTGESSTLYLSGSHQSYWGTDRTDRQ LNAGFNSSVNDISWSLNYSLSRNAWQHETDRILSFDVSIPFSHWMRSDSTSAWRNASARYSQTLEAHGQAASTAGLYGTS LGDNNLGYSIQSGYTRGGYEGSSKTGYASLNYRGGYGNASAGYSHSGGYRQLYYGLSGGILAHANGLTLSQPLGDTLILV RAPGASDTRIENQTGVSTDWRGYAVLPYATDYRENRVALDTNTLADNVDIENTVVSVVPTHGAVVRADYKTRVGVKVLMT LMRNGKAVPFGSVVTARNGGSSIAGENGQVYLSGMPLSGQVSVKWGSQTTDQCTADYKLPKESAGQILSHVTVSCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 99 |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD_1 | YP_008570958.1 | Outer membrane usher protein fimD precursor | VFG1645 | Protein | 0.0 | 99 |
| fimD_1 | YP_008570958.1 | Outer membrane usher protein fimD precursor | VFG0912 | Protein | 0.0 | 99 |
| fimD_1 | YP_008570958.1 | Outer membrane usher protein fimD precursor | VFG0876 | Protein | 0.0 | 65 |
| fimD_1 | YP_008570958.1 | Outer membrane usher protein fimD precursor | VFG0446 | Protein | 2e-179 | 47 |
| fimD_1 | YP_008570958.1 | Outer membrane usher protein fimD precursor | VFG0454 | Protein | 8e-171 | 41 |
