Gene Information

Name : ECOPMV1_01054 (ECOPMV1_01054)
Accession : YP_008570940.1
Strain : Escherichia coli PMV-1
Genome accession: NC_022370
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1098322 - 1098915 bp
Length : 594 bp
Strand : +
Note : Protein of unknown function (DUF3296)

DNA sequence : 
ATGTATAATGCTAATCCCAATTACGAAATGGACTTCATGATTCTGAAAGACGTGAATGAACACATGGAAGGTCTGTTTCA
ACGTTTTTCTAAACTGTTACCTTTCAGAATTGATTTTGCCTACAGGAAAGACACGCCCAGTTTTGGTCATTCCTGTAGGC
ACAGTATGTGTATTGAAATGCACCGCTTACTTAGTGAAACCCAAACGATGCTGGCGGGATATTACTGGGTAATGGAATAT
ACGTCAAACAAGGGACTTCATATTCATTTTATCGGCTACCTGGATGGGCAACGTCACAAGAAATCTTATCGGATATCCAG
GCAACTGGGAGATATCTGGAGGCGGATCACGGAAGGGGAGGGTTATTTTCACCTGTGCAGGGCTAAAGACAAATACCCGG
TGCGTATCGATCACGTGATTCACTATAGTGATAAGTCTGCGGTAGACGGTTTACGTTACGCCCTTAGCTACCTGGCTAAA
CAGGATCAGAAAGAACACGGTATTATTCTGAGGCGTAGCAGGCTTTCCGAAAAAAGCAACCGGGGCCGACCACGACTGAA
CAGCATCCTGCCAGGGATATGTTCTCAGCTGTAA

Protein sequence : 
MYNANPNYEMDFMILKDVNEHMEGLFQRFSKLLPFRIDFAYRKDTPSFGHSCRHSMCIEMHRLLSETQTMLAGYYWVMEY
TSNKGLHIHFIGYLDGQRHKKSYRISRQLGDIWRRITEGEGYFHLCRAKDKYPVRIDHVIHYSDKSAVDGLRYALSYLAK
QDQKEHGIILRRSRLSEKSNRGRPRLNSILPGICSQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 8e-86 99
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 8e-86 99
unnamed AAL08430.1 unknown Not tested SRL Protein 5e-82 90
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 3e-61 63
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 3e-61 63
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 1e-56 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOPMV1_01054 YP_008570940.1 hypothetical protein VFG1021 Protein 2e-82 90
ECOPMV1_01054 YP_008570940.1 hypothetical protein VFG0646 Protein 8e-62 63