Gene Information

Name : lysS (kw2_0372)
Accession : YP_008568040.1
Strain : Lactococcus lactis KW2
Genome accession: NC_022369
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase LysS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 369393 - 370877 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
TTGGCTGAAATCGAAGAACTTAATGACCAAATGAAAGTCCGCCGTGAAAAAATGGAAAACCTGCGCGATGCAGGAATTGA
CCCATTTGGACATAAATTTACACGTACGCACAACTCGCAAGAACTACACGAAGCTTATGACGAAAAGACGAAAGAAGAGT
TGCATGAACTTGCACTTTCAGGAATTGTCGCTGGTCGTTTGATGACTAAACGTGGTAAAGGTAAAGTCGGTTTCGCCCAT
CTTCAAGACCGCGAAGGCCAAATTCAACTTTACGTTCGTAAAGACGAAGTTGGTGAAGAAAATTATGAAATTTTCAAAAA
AGCTGACCTCGGAGACTTCCTCGGAGTTGAAGGCGAAATCATGAAAACTGATATGGGTGAATTGTCAATTAAAGCAAAAA
AATTGACTTTCCTCTCAAAAGCGCTTCGTCCTTTGCCTGAAAAATTCCATGGTTTGACTGATACTGAAACACGTTATCGC
AAACGTTATTTGGATTTGATTTCAAATAAAGAAAGCTTTAATCGCTTTGTGACTCGTTCAAAAATTATCAGTGAAATCCG
TCGTTATATGGATGGTCGTGGATATCTTGAAGTTGAAACTCCAGTTCTTAACAACGAAGCTGGTGGTGCTTCTGCTCGCC
CATTCTACACTCACCATAACAGCCTTGATATTGACATGGCACTTCGTATTGCAACTGAATTGCACTTGAAACGTTTGATT
GTTGGTGGAATGGAAAAAGTTTATGAACTTGGCCGTGTCTTCCGTAATGAAGGAATGGATATGACTCATAATCCTGAATT
CACAACAATGGAATCTTATGAAGCTTATGCTGATTTTGAAGATATTATGGATTTGACAGAAGGAATCTTCCAACACGTTG
CTAAAACTGTAGTTGGTCAAGATGTTCTTGAGTACGATGGTAAAGAAATCAATGTTGGTGGAAAATTCAAACGTGTTCAC
ATGGTTGATGCCATCAAGGAAGTTGCTGGAGTTGATTTCTGGCCTGAGATGACTTTTGAAGAAGCAACTGCTCTTGCAAA
AGAACATGACATTCATGTTGAAAAACATTTCACTTCTGTTGGTCACATCATTAACGAATTCTTTGAAAAATATGTTGAAG
AAACTTTGATTCAACCTACTTTCGTTTTTGGTCATCCAAAAGAAATTTCACCACTTGCTAAAATGAATGAAAAAGACCCA
CGTTTTACTGACCGTTTTGAACTTTTCATCAACGGTAAAGAATACGCCAATGCTTTCAGCGAATTGAATGACCCAATTGA
CCAATTGGAACGTTTTGAAGCTCAAGCCAAAGCTAAAGAACTTGGGGATGATGAAGCAACTGGTGTCGATTATGATTACG
TTGAAGCACTCGAACACGGTATGCCACCAACAGGTGGACTCGGTATCGGGATTGACCGCTTAGTGATGCTCTTTACTGGC
ACAACTTCAATCCGTGACGTTTTGCTTTTCCCAACGATGAAATAA

Protein sequence :
MAEIEELNDQMKVRREKMENLRDAGIDPFGHKFTRTHNSQELHEAYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAH
LQDREGQIQLYVRKDEVGEENYEIFKKADLGDFLGVEGEIMKTDMGELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYR
KRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVLNNEAGGASARPFYTHHNSLDIDMALRIATELHLKRLI
VGGMEKVYELGRVFRNEGMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVH
MVDAIKEVAGVDFWPEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPLAKMNEKDP
RFTDRFELFINGKEYANAFSELNDPIDQLERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTG
TTSIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-114 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_008568040.1 lysyl-tRNA synthetase LysS VFG1668 Protein 2e-114 50