Gene Information

Name : kw2_0330 (kw2_0330)
Accession : YP_008567998.1
Strain : Lactococcus lactis KW2
Genome accession: NC_022369
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 322072 - 322851 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence :

ATGTATTTTGGTGCGAAAAATATCAATGTGTCTTATGGAAAAGAGCAGGTATTGAAAAACGTAACGCTGTCGATTGAAAA
AGGAAAAACGACAGCTATTATTGGAGTCAATGGTTCTGGAAAATCAACGATACTAAAAGCCCTAGGGCGCTTGATTAAAG
CAGAAGGTCAGGTTATTTTTGATAATCAGCCCTTAAGCAATCATTCAAATCGGGAGATTGCTCGCATTTTAGCCCTATTG
CCTCAATCAATTACTGCTCCTGCAGATATTACAGTCTATGAGCTTGTTAGTCTAGGACGTTTCCCACATCAAAAACTGAT
GCAACAACGTTTATCAAAAGAAGATATTACTTTTATTGAGGAATTAATGAGGGAAACAAATGTTTGGGATATTCGTGAAA
GTAAAGTATCAGAACTTTCTGGTGGGCAAAAACAAAGAGTATTTATCACAATGATTTTAGCCCAAGATAGTGAGATTATT
TTACTAGATGAACCCACAACGTATTTGGATTTAGCTCATCAGTTGGATATTTTGTGTCTGCTTAAAGATTTAGCGACAAA
GCGAAATAAAACCATTGTTTACGTTATTCATGACTTGAACCATGCCGCTCGTTTTGCTGACAACCTAGTTCTCGTCAAAG
ATGGGGAAGTGGTCGAGCAAGGGACTGTTGATGACTTATTTACTCAAAAAACATTGAAAGAATGCTTTGGATTGGACGTT
ACTTTAGGATGTGATACCTTTACCAAAAAATTAATGATTACTGGGGTGAAAGATGCCTAA

Protein sequence :

MYFGAKNINVSYGKEQVLKNVTLSIEKGKTTAIIGVNGSGKSTILKALGRLIKAEGQVIFDNQPLSNHSNREIARILALL
PQSITAPADITVYELVSLGRFPHQKLMQQRLSKEDITFIEELMRETNVWDIRESKVSELSGGQKQRVFITMILAQDSEII
LLDEPTTYLDLAHQLDILCLLKDLATKRNKTIVYVIHDLNHAARFADNLVLVKDGEVVEQGTVDDLFTQKTLKECFGLDV
TLGCDTFTKKLMITGVKDA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	6e-48	46
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-41	44
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-41	44
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-41	44
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-41	44
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	7e-46	43
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	5e-43	43
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	5e-43	43
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	7e-42	43
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	7e-46	42
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	7e-46	42
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	6e-46	42
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	6e-46	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
kw2_0330	YP_008567998.1	ferrichrome ABC transporter ATP-binding protein	BAC0164	Protein	4e-46	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
kw2_0330	YP_008567998.1	ferrichrome ABC transporter ATP-binding protein	VFG1042	Protein	4e-46	43
kw2_0330	YP_008567998.1	ferrichrome ABC transporter ATP-binding protein	VFG0925	Protein	2e-43	43