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Name : LY180_04940 (LY180_04940) Accession : YP_008564109.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : fimbrial protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 1060493 - 1063048 bp Length : 2556 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGC TTTTTTCAAAGATGATCCCTCAATGGTGGCCGATTTGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATC GTGTCGATATTGTTCTGAATCAGACAATTGTAGATACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATT GCCGCCTGTTTGACGACTGAAAGCCTGGATGCAATGGGTGTTAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAA ACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTT CAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTA TTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAA TTTAAACAGTGGCGTTAATTTAGGCCCATGGAGATTGCGCAACAATTCAACATGGAGTCGCAGTAGTGGCCAAACCGCAG AATGGAAGAATCTCAGCAGCTATTTGCAGCGGGCGGTTATTCCACTAAAAGGCGAACTGACCGTAGGTGATGATTATACT GCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAA AGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAAGCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACC AAACTTATGTATCGCCTGGTGCTTTTGAAATTAGTGATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATC AAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGTACCGTTTTCCAGCGTGCCATTACTCCAGCGTCAGGGGCGAATCAA ATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGT GGGGCGGACCGTGGGGAACGACATGGTATGGTGGTGGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGA TTTAACCTTGGCGATTTCGGAGCAATTTCGTTCGATGCGACCCAGGCGAAGAGTACGCTGGCAGACCAAAGCGAACATAA AGGTCAGTCATATCGTTTTCTGTATGCCAAAACGCTCAACCAATTGGGCACTAATTTTCAATTGATGGGCTATCGCTATT CGACGTCGGGTTTCTACACCCTTTCCGACACCATGTATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAA GATACGCCGATGTGGTCGCGTTATTACAATTTGTTTTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATT AGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCCAGCAAACTTACTGGCATACCGATCAACAGGATCGGCTATTACAGT TTGGCTACAACACGCAAATTAAAGATCTCTCGCTGGGGGTTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCT GATCAGGTGTTTGCACTAAATTTTTCCCTGCCGCTCAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAA AAATTACGCCTGGATGACCTCTAACACCAGTATCGATAACGAAGGGCACATTACACAAAACCTGGGTTTAACGGAGACAC TACTCGATGACGGTAACCTGAGCTACAGCGTGCAACAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGC ATGGACTACAAAGGGGCGTTTGCAGATGCCCGAGTGGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTA CGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGGGCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTGCTGATTG CAGCACCAGGCGCAGAGAATACTCGTGTGGCGAACAGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTCCCC TATGCCACTTCTTATCGGGAAAATCGAATCGCACTTGATGCGGCATCGTTAAAACGTAACGTGGATCTTGAAAATGCAGT AGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTCTGGCGGAGTTCAATGCCCATGCGGGAGCAAGGGTATTAATGAAAA CATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCGATAGCGACGCTGGACGGCATACAGACTAATAGCGGCATTATTGAT GATGATGGCTCGCTCTATATGTCCGGTTTGCCCGCTCAGGGAGCGATAACTGTACGCTGGGGCGAAGCTCCCGATCAAAT TTGTCATATCAGTTACCAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA Protein sequence : MPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGI AACLTTESLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINAL LLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYT AGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEI KEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLG FNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDE DTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGVSWNYSKSRGQPDA DQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSAS MDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVP YATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRFGAIATLDGIQTNSGIID DDGSLYMSGLPAQGAITVRWGEAPDQICHISYQLTEQQINSAITRMDAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_04940 | YP_008564109.1 | fimbrial protein FimD | VFG0876 | Protein | 0.0 | 49 |
| LY180_04940 | YP_008564109.1 | fimbrial protein FimD | VFG0446 | Protein | 5e-180 | 49 |
| LY180_04940 | YP_008564109.1 | fimbrial protein FimD | VFG1645 | Protein | 0.0 | 46 |
| LY180_04940 | YP_008564109.1 | fimbrial protein FimD | VFG0912 | Protein | 0.0 | 46 |
| LY180_04940 | YP_008564109.1 | fimbrial protein FimD | VFG0454 | Protein | 6e-170 | 45 |
