Gene Information

Name : LY180_04935 (LY180_04935)
Accession : YP_008564108.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Virulence
Product : fimbrial protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1059722 - 1060423 bp
Length : 702 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGCATGGGCGGC
AGGTAAAGGCGGGATTGGACTTGCAGCAACACGTCTTGTTTATTCAGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTA
ACACCAGTCCGGATGTTCCTTATCTTATTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCAGATTTTATTATT
ACACCACCGCTATTTGTGCTGAATCCGGCTAATGAGAATCTGTTACGCATTATGTACATTGGTGCGCCGTTGGCGAAAGA
CAGAGAAACCCTTTTCTTCACTAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAGGGAAATACCCTGAAGATTG
CCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGT
TGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGG
AAAAGTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTTTCTCTGCCAAAGGGGGCCAAAAATAGCAGCG
TAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFII
TPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR
CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-37 45
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LY180_04935 YP_008564108.1 fimbrial protein VFG1644 Protein 2e-37 45
LY180_04935 YP_008564108.1 fimbrial protein VFG0875 Protein 1e-38 45
LY180_04935 YP_008564108.1 fimbrial protein VFG0911 Protein 1e-37 44
LY180_04935 YP_008564108.1 fimbrial protein VFG0445 Protein 9e-38 43