Gene Information

Name : LY180_22485 (LY180_22485)
Accession : YP_008567498.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Virulence
Product : malate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4705035 - 4705649 bp
Length : 615 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAACTGAATGAACGTTATGGCAAGCCTAATGCACACTATATGAAACGTCTGGAAGAGATTACTCGCTATGCGATGGA
TGATTACGCCAGAATACTGGCTTTCAGAGTGGATTTATTACTGCCAGTGGATAATAGCCATAAAGGGTATGACTCAGCGG
TTATTACCCGTTTTATAGCCTCACTGAAAGCACAGATAGCCGCATATTTACAACGTCGCAGGAGAGACGGTAAACGTGTT
TATCCCTGTAAGCTGCGATATGCATGGGTAAGAGAATTTGGTGAACTGAATGGCAACAAGCATTATCACATGCTGTTGTT
GGTTAATCGGGAAGTATTCAGGAATACCATGCTGAATACGGAGAATTCAGCGCAACCTCGCGGATTGCTGGTGGGAATGG
TAGCGCGTGCATGGGCTGTGGCGCTTAGACGTACCGGAGATATGGCAAAGAAAGTCCCCTTTCATTTACCGGGCGTCTCT
TATGAACTGGATCGCAGAAATGGCACAAATACGGACTTTTTCCGCAGCTACATATACCACATCAGTTATCTGGCGAAGGA
GTACACCAAAAACCACGATGACGGTGAACGTAACTTTGGTTGTAGTCAGGGATAA

Protein sequence : 
MKLNERYGKPNAHYMKRLEEITRYAMDDYARILAFRVDLLLPVDNSHKGYDSAVITRFIASLKAQIAAYLQRRRRDGKRV
YPCKLRYAWVREFGELNGNKHYHMLLLVNREVFRNTMLNTENSAQPRGLLVGMVARAWAVALRRTGDMAKKVPFHLPGVS
YELDRRNGTNTDFFRSYIYHISYLAKEYTKNHDDGERNFGCSQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 1e-30 46
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-30 45
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 3e-30 45
unnamed AAL08464.2 unknown Not tested SRL Protein 3e-28 44
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-28 44
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LY180_22485 YP_008567498.1 malate transporter VFG1055 Protein 1e-28 44