Gene Information

Name : LY180_22335 (LY180_22335)
Accession : YP_008567469.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 4670138 - 4671142 bp
Length : 1005 bp
Strand : -
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCCGGGTTTTATCATAAGCATTTCCTGAAATTACTCGATTTCACGCCAGCTGAACTCAACAGCCTGCTGCAGTTAGC
CGCGAAGCTGAAAGCCGATAAGAAAAGCGGCAAAGAAGAAGCCAAACTCACTGGTAAAAACATCGCGCTCATCTTCGAAA
AAGACTCGACCCGTACCCGATGCTCTTTCGAAGTTGCCGCATATGACCAGGGTGCTCGCGTTACTTATCTCGGCCCAAGC
GGCAGTCAGATTGGTCATAAAGAGTCGATTAAAGACACTGCCCGCGTGCTGGGTCGCATGTATGACGGTATTCAGTATCG
CGGCTATGGTCAGGAGATTGTCGAAACACTGGCGGAATACGCTGGCGTGCCGGTATGGAACGGCCTGACCAATGAGTTTC
ACCCCACGCAGTTGCTGGCGGATCTCCTCACCATGCAGGAGCATTTACCCGGTAAAGCATTCAACGAAATGACGCTGGTC
TATGCAGGTGACGCACGTAACAACATGGGCAATTCGATGCTCGAAGCTGCGGCGCTTACCGGTCTGGATTTGCGTCTGGT
CGCGCCACAGGCATGCTGGCCGGAAGCTGCGCTGGTTACGGAATGCCGCGCCCTGGCACAGCAAAATGGCGGGAATATTA
CGCTGACGGAAGATGTAGCCAAAGGAGTTGAAGGTGCTGACTTTATCTATACCGATGTATGGGTGTCGATGGGGGAAGCA
AAAGAGAAATGGGCAGAACGGATTGCATTACTGCGTGATTATCAGGTGAACAGCAAGATGATGCAGTTGACCGGTAACCC
GGAGGTCAAATTCCTCCACTGCCTGCCCGCGTTTCATGACGACCAGACGACGCTTGGTAAGAAAATGGCGGAAGAGTTTG
GCCTACATGGCGGAATGGAAGTGACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGC
ATGCATACCATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAA

Protein sequence :
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPS
GSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA
KEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENR
MHTIKAVMVATLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-90 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-90 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-90 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-90 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-90 59