Gene Information

Name : LY180_20495 (LY180_20495)
Accession : YP_008567124.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Unknown
Product : major tail tube protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4278446 - 4278964 bp
Length : 519 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCAATGCCGCGCAAACTCAAGTTAATGAACGTCTTTCTGAACGGCTACAGCTATCAGGGCGTTGCAAAGTCCGTCAC
GCTGCCAAAACTGACCCGTAAGCTCGAAAACTATCGCGGTGCGGGGATGAACGGCAGCGCACCGGTAGACCTCGGCCTTG
ATGACGATGCGCTGTCAATGGAGTGGTCGCTCGGTGGCTTCCCGGATTCAGTTATCTGGGAGCTTTACGCCGCAACCGGT
GTGGATGCTGTGCCGATTCGTTTTGCAGGCTCTTACCAGCGTGACGATACCGGCGAAACGGTGGCCGTCGAAGTGGTCAT
GCGTGGACGTCAGAAAGAAATCGACACCGGCGAGGGCAAACAGGGAGAAGACACCGAGTCGAAAATCTCCGTGGTCTGCA
CCTATTTCCGGCTGACGATGGACGGTAAGGAGCTGGTCGAAATCGACACCATCAACATGATTGAGAAGGTGAACGGCGTC
GACCGGCTGGAGCAACACCGCCGCAATATCGGCCTGTGA

Protein sequence :
MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMNGSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATG
VDAVPIRFAGSYQRDDTGETVAVEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGV
DRLEQHRRNIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 9e-44 53
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 2e-36 52
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 2e-36 52