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Name : LY180_18880 (LY180_18880) Accession : YP_008566821.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : Rha family transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 3966008 - 3966211 bp Length : 204 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGCACCATTGATATTTATAACGATAAGTTCGTCAGCATGCAGTTCATTACTGAACTGACTGGGTTATCCGATAAATG GTTTTATAAGCTTGCACAGGAAGGTAAGTTTCCAAAACCTGTAAAGTTTGGTCGTAGTTCCCGCTGGATTGAACGTGAAG TAAAAGAATGGTTAGAAGCCCGCATTAATGACTCGAGAGCATAA Protein sequence : MSTIDIYNDKFVSMQFITELTGLSDKWFYKLAQEGKFPKPVKFGRSSRWIEREVKEWLEARINDSRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rox | AAR97599.1 | regulator of excision | Not tested | SHI-1 | Protein | 5e-17 | 57 |
| unnamed | CAE85187.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 3e-17 | 57 |
| S3190 | NP_838473.1 | hypothetical protein | Not tested | SHI-1 | Protein | 8e-17 | 57 |
| SF2987 | NP_708761.1 | hypothetical protein | Not tested | SHI-1 | Protein | 8e-17 | 57 |
| ECO103_3577 | YP_003223438.1 | transcriptional regulator | Not tested | LEE | Protein | 4e-17 | 57 |
| Z1188 | NP_286723.1 | hypothetical protein | Not tested | TAI | Protein | 5e-12 | 56 |
| Z1627 | NP_287131.1 | hypothetical protein | Not tested | TAI | Protein | 5e-12 | 56 |
| unnamed | CAI43835.1 | hypothetical protein | Not tested | LEE | Protein | 5e-17 | 56 |
| unnamed | ADD91712.1 | putative transcriptional regulator AlpA | Not tested | PAI-I AL862 | Protein | 5e-17 | 56 |
| unnamed | CAD33739.1 | hypothetical protein | Not tested | PAI I 536 | Protein | 2e-15 | 55 |
| c5192 | NP_757040.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 3e-15 | 55 |
| unnamed | AAL08466.1 | unknown | Not tested | SRL | Protein | 7e-17 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_18880 | YP_008566821.1 | Rha family transcriptional regulator | VFG0651 | Protein | 2e-17 | 57 |
| LY180_18880 | YP_008566821.1 | Rha family transcriptional regulator | VFG1480 | Protein | 9e-16 | 55 |
| LY180_18880 | YP_008566821.1 | Rha family transcriptional regulator | VFG1057 | Protein | 3e-17 | 54 |
