Gene Information

Name : araD (LY180_18425)
Accession : YP_008566731.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 3863957 - 3864652 bp
Length : 696 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAGCAACTGAAAGCCGACGTGCTGGCGGCGAATCTGGCGCTTCCCGCTCACCATCTGGTGACGTTCACCTGGGG
CAATGTCAGCGCGGTAGACGACACGCGGCAATGGATGGTAATCAAACCTTCCGGCGTCGAGTACGACGTGATGACCGCCG
ACGATATGGTGGTGGTTGAGATAGCCAGCGGCAAGGTGGTGGAAGGTAGCAAAAAGCCCTCGTCCGACACGCCAACGCAT
CTGGCGCTTTACCGTCGCTACGCCGAAATCGGTGGCATTGTGCATACCCACTCACGCCACGCCACCATCTGGTCGCAGGC
CGGGCTGGATCTCCCCGCCTGGGGCACCACGCACGCTGATTATTTCTATGGTGCCATCCCCTGCACGCGACAGATGACCG
CAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCG
GCACAAATCCCGGCGGTGCTGGTGCATTCTCATGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGC
CGTAGTACTCGAAGAATGCGCCTATATGGGCCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTACGATGCAAAACGAAC
TGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAA

Protein sequence :
MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDDTRQWMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTH
LALYRRYAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSP
AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPTMQNELLDKHYLRKHGANAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 6e-55 54