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Name : LY180_15350 (LY180_15350) Accession : YP_008566134.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : type II secretion system protein C Function : - COG functional category : - COG ID : - EC number : - Position : 3227401 - 3228231 bp Length : 831 bp Strand : - Note : part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm; Derived by automated computational analysis using gen DNA sequence : ATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATA TACGGCTGTTTCCCCATCGGCGAATAAACCGCCCCGTGCGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCA GCCAGCAAAACTGGTTTGGCAAATATCAGCCCGTCGCCACGCCGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACG CGTCTTAATGTGGTGCTGCGCGGGATTGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGT CTATTTGCAGGGTGAAACGCTTGGCTCGCACAATGCGGTGATTGAGGAAATCAATCGCGACCATGTGATGCTGCGCTATC AGGGAAAAATAGAGCGCCTGAGCCTGGCAGAAGAGGGGCATTCCACCGTAGCCGTGACCAACAAAAAAGCTGTCAGTGAC GAAGCAAAGCAAGCTGTTGCTGAACCTGCTGTCAGTGCGCCAGTGGAGATCCCGACTGCCGTGCGTCAGGCACTGGCGAA AGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGAATTGTCGGTTATGCAGTGAAGCCGG GGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACT GATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGC GCGCCACGACATTTCCATCGCGCTGCGCTAA Protein sequence : MFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRADAKTFDKNDVQLISQQNWFGKYQPVATPVKQPEPVPVAET RLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEGHSTVAVTNKKAVSD EAKQAVAEPAVSAPVEIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFT DPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-118 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_15350 | YP_008566134.1 | type II secretion system protein C | VFG2046 | Protein | 4e-117 | 94 |
