Gene Information

Name : LY180_15330 (LY180_15330)
Accession : YP_008566130.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3222123 - 3222578 bp
Length : 456 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGTTGGGCAACAAAGAGAAAGCCGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCACTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACAGAACAGGGGCTTGAGGCGCTG
ATCCAGCAGCCAGCCAATATGGCGGACTCCCGCAACTACCGTACTGGTGGATACATTAAACGACTGCCAAAGGATCCGTG
GGGCAATGATTATCAGTATCTCAGTCCGGGTGAAAAAGGGCTGTTTGATGTTTATACCCTGGGGGCGGATGGTCAGGAAA
ACGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-66 100
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LY180_15330 YP_008566130.1 general secretion pathway protein G VFG2050 Protein 3e-66 99
LY180_15330 YP_008566130.1 general secretion pathway protein G VFG0180 Protein 2e-37 55
LY180_15330 YP_008566130.1 general secretion pathway protein G VFG1871 Protein 1e-33 53