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Name : LY180_14715 (LY180_14715) Accession : YP_008566009.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 3097640 - 3097825 bp Length : 186 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGACGATATTGTTTTTGCGGGGAATAGGGCGCTGTATCTGATTTTAGTTATGTCTGCAGGACCTATTGCAGTTGCGAC ATTTGTTGGTTTATTGGTAGGGCTTTTTCAAACGGTAACGCAGTTGCAAGAACAGACGTTGCCATTTGGCGTGAAATTAT TGTGCGTAAGTATTTGCTTTTTTTAA Protein sequence : MDDIVFAGNRALYLILVMSAGPIAVATFVGLLVGLFQTVTQLQEQTLPFGVKLLCVSICFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 9e-23 | 100 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 8e-23 | 99 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-16 | 74 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-16 | 74 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 2e-16 | 74 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 2e-16 | 74 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 2e-18 | 74 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 9e-12 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_14715 | YP_008566009.1 | type III secretion protein | VFG0550 | Protein | 7e-17 | 74 |
| LY180_14715 | YP_008566009.1 | type III secretion protein | VFG2454 | Protein | 2e-08 | 59 |
