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Name : LY180_14710 (LY180_14710) Accession : YP_008566008.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 3096797 - 3097564 bp Length : 768 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGGGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTTCGTCACCCAATAATAATAGTGGTATCATGTGCAT TAGTTCAGCATTACCACTATGAATTATTGAACTTAAATGAAATCGATATTGCTTTGTTCGCTGCCAGAGAAATTATCATA GGGCTGTTTATTGCATGCTTATTAGCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGCTTTATCGATAACCAACGCGG TGCAACATTAAGTAGTACTTTGGATCCGGCTACAGGTGTCGATACCTCGGAATTAGCAAGATTATTTAACCTTTTCTCTG CTGCGGTTTATCTTACTAAAGGTGGAATGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA TTTCACTGACTATCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGCCCCAATACTGGCTGAACGAGTAATG CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG Protein sequence : MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHYELLNLNEIDIALFAAREIII GLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTKGGMNFILETLWQSYNLWPSG NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTIKSALAFLILIIYFAPILAERVM PLSFFPEQLQLYIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaR | AAZ31291.1 | EpaR | Virulence | ETT2 | Protein | 1e-81 | 97 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 6e-40 | 46 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 6e-40 | 46 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 3e-40 | 46 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 8e-39 | 45 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 3e-30 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_14710 | YP_008566008.1 | type III secretion protein | VFG0549 | Protein | 1e-40 | 46 |
| LY180_14710 | YP_008566008.1 | type III secretion protein | VFG1014 | Protein | 7e-36 | 43 |
