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Name : LY180_14320 (LY180_14320) Accession : YP_008565931.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : EvpB/family type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 3007331 - 3008869 bp Length : 1539 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCTGTACAACAAGAACATGCCACCTCTGAAACTGCAACACTGACCACCACTGAGTCCGGCGGCGTTTATCAGTCCCT GTTTGATAAAATTAATTTAACCCCGGTGTCTTCCATTCAGGAAATAGATTTATGGCAAAACAGCGAAACACTGGCGGATG CCTCACCCGATGAGCGCGTGACAGCGGCGATTCACGTTCTACTTTCCTGTCTGGCGAAATCAGGCGAGAACGTGGTCAAG CTCGACAAGAGCCTGCTGGATTTTCATATCGACGATTTGGATCAGAAAATCAGTAAACAGCTTGATGCGGTCATGCACCA TCCTGAATTCCAGAAAGTCGAGTCGCTGTGGCGCGGCACATGGTTCGTCGTACAGCGCACTGATTTTCGCAAAAATGTCA GAATTGAATTGCTGGATATCAGCAAAGAGCATCTGCGTCAGGATTTCGACGACTCCCCGGAAATCATTCAGAGCGGTTTA TATCGTCATACATACATTCAGGAGTACGATACGCCGGGTGGCGAACCTGTTGCCTCATTAATTTCCAGCTATGAATTTGA TAACAGCCCGCAGGATATTGCCCTGCTGCGCAATATTTCCAGAGTGTCTGCCGCTTCCCATATGCCTTTTATCGGTTCTG TCGGGCCGAAATTCTTCCTTAAAAATTCGATGGAAGAAGTCGCCGCGATTAAAGATATCGGCAACTACTTTGACCGCGCA GAATATATTAAATGGAAATCGTTTCGTGATACCGATGACAGCCGCTATGTGGGATTAGTGATGCCGCGAGTGCTGGGCCG TCTGCCCTATGGGCCGGACACGGTGCCGGTACGCAGCTTTAACTATGTGGAAGAAGTCAAAGGCCCGGATCACGAAAAGT ATCTCTGGACAAACGCCTCGTTCGCCTTTGCCGCCAATATGGTGAAGAGCTTTGTGAATAATGGCTGGTGCGTGCAGATC CGTGGTCCACAAGCAGGTGGCGCAGTGGCCGATCTGCCCATCCATCTTTACGATCTCGGCACCGGCAATCAGGTCAAAAT TCCGTCCGAAGTGATGATCCCGGAAACCCGCGAATTTGAATTTTCCAACCTTGGCTTTATTCCGCTCTCTTATTATAAGA ATCGCGATTACGCCTGCTTCTTCTCGGCAAACTCTGCCCAGAAACCGGCGTTGTATGATACCGCTGACGCCACCGCCAAC AGCCGTATTAACGCCCGTCTGCCCTATATCTTCCTGCTGTCCCGCATTGCGCATTACCTGAAAATCATCCAGCGCGAGAA TATCGGTACCACCAAAGACCGCCGCGTACTGGAACTGGAACTGAACACCTGGATCCGCACACTGGTGACGGAGATGACCG ATCCGGGTGATGAACTGCAGGCGTCTCACCCGCTGCGCGACGGTAAGGTTATCGTGGAAGATATTGAGGACAATCCGGGC TTCTTCCGCGTCAGACTCTTTGCCGTGCCGCATTTCCAGATTGAAGGGATGGATATCAACCTGTCACTGGTTTCCCAGAT GCCGAAAGCGAAAGCCTGA Protein sequence : MSVQQEHATSETATLTTTESGGVYQSLFDKINLTPVSSIQEIDLWQNSETLADASPDERVTAAIHVLLSCLAKSGENVVK LDKSLLDFHIDDLDQKISKQLDAVMHHPEFQKVESLWRGTWFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGL YRHTYIQEYDTPGGEPVASLISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSMEEVAAIKDIGNYFDRA EYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNASFAFAANMVKSFVNNGWCVQI RGPQAGGAVADLPIHLYDLGTGNQVKIPSEVMIPETREFEFSNLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATAN SRINARLPYIFLLSRIAHYLKIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPG FFRVRLFAVPHFQIEGMDINLSLVSQMPKAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-98 | 43 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_14320 | YP_008565931.1 | EvpB/family type VI secretion protein | VFG2093 | Protein | 9e-104 | 44 |
| LY180_14320 | YP_008565931.1 | EvpB/family type VI secretion protein | VFG2475 | Protein | 9e-108 | 44 |
| LY180_14320 | YP_008565931.1 | EvpB/family type VI secretion protein | VFG2070 | Protein | 3e-86 | 42 |
