Name : gabD (LY180_13480) Accession : YP_008565772.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 2841428 - 2842876 bp Length : 1449 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGTCTGATGACCCTCGAACAGGGTAAACCGCTGGCTGAAGCGAAAGG TGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCTGAAGAAGGCAAACGCATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTTACCGCCGCCATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAACCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCGGAGCTGGCGATTCGCGCGGGCATTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGG GCGCAGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAACTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAG TTAATGGAACAATGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTCGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGACCTCGACAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCGAC GGGCTGGATAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCAGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCACACGAACGTGGCGGCAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCCAACGCTAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA GCCGATGTGATCGCGCAAGCCAATGACACCGAATTTGGTCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGGATTATTTCCAATGAAGTGGCCCCGTTCGGCG GCATCAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-158 | 67 |