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Name : pspF (LY180_01285) Accession : YP_008563403.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 285900 - 286886 bp Length : 987 bp Strand : + Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCC GGTGCTCATTCAGGGCGAAACCGGCGCGGGCAAAGAGTGCGTGGCGAAATATATTCACACAGTCGCCTTTGGTGAAAATG AAAACGCGCCCTATATCGGCGTGAACTGCGCTGCGATCCCGGAAAACATGCTGGAAGCAACCTTATTTGGCTACGACAAA GGCGCATTTACCGGCGCAATTGCCAGTGTGCCAGGAAAAATGGAACTGGCGAATAACGGCACCTTATTACTCGATGAAAT TGGCGATATGCCGCTGGCGTTACAGGCCAAAATATTACGCGTATTGCAGGAACAACAGGTTGAGCGATTAGGCAGCAACC GACAAATTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAGCAGGAAGTCGCCGCCGGGCGTTTTCGT GAAGATCTCTATTATCGTCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGTGAACGTCTGAACGATATTATTCCGCT GGCAGAGTCATTTATAAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACCCGCCGTGCGATGC TGAATTACCGCTGGCCCGGCAATGTGCGCCAGCTGGAGAACGCCATTCAGCGGGGAATGATTTTAAATCGCGACGGCGTG ATTTACCCGGACGCCTTAGGCCTGCCGGAAAATGACATTGCCGACCACAGCGAACTGCAATGGCCTGCTCAGCCCGCCGT ACACATTGCCGAAACCAGCGATTTAGGCCAGCACGGACGAAGCGCCCAGTATCAATATATCGCTGACCTGATGCGTAAAT ATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGTATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGC AAGCACGGTATCGAAGTTTTCTCCTGA Protein sequence : MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENENAPYIGVNCAAIPENMLEATLFGYDK GAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFR EDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRAMLNYRWPGNVRQLENAIQRGMILNRDGV IYPDALGLPENDIADHSELQWPAQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMR KHGIEVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 5e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pspF | YP_008563403.1 | transcriptional regulator | VFG1249 | Protein | 4e-71 | 48 |
