Gene Information

Name : LY180_10750 (LY180_10750)
Accession : YP_008565244.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Unknown
Product : tail sheath protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2251910 - 2253100 bp
Length : 1191 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGCGACTATCATCATGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACTGTATCCACCGCCAT
TGTCGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAAGCTTCCCCCTCAATAAACCGGTGCTGATTACCAATGTGC
AGAGCGCAATTGCAAAGGCCGGTAAAAAAGGTACGCTGGCGGCGTCGTTGCAGGCCATCGCTGACCAGTCAAAACCGGTC
ACCGTTGTCGTGCGCGTGGAAGACGGAACCGGCGACGACGAAGAAACGAAGCTCGCGCAGACCGTTTCCAATATCATCGG
CACCACCGACGAAAATGGTCAGTATACCGGACTGAAAGCTCTGCTGGCGGCAGAGTCGGTAACCGGTGTTAAACCGCGTA
TTCTTGGTGTGCCGGGGCTGGATACCAAAGAGGTGGCTGTTGCACTGGCATCAGTCTGTCAGAAGCTGCGCGCTTTCGGA
TATATCAGCGCATGGGGCTGTAAGACCATTTCCGAGGTGAAAGCCTACCGCCAGAATTTCAGCCAGCGTGAGCTGATGGT
CATCTGGCCGGATTTCCTCGCATGGGATACGGTCAGCAGCACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGTC
TGCGCGCTAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAATGTCGGGGTAAACGGTGTTACCGGCATCAGT
GCCTCTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTTAACGAGTCAGGCGTCACAACGCTGATTCG
CCGTGACGGTTTCCGCTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACACCCGCACCG
CGCAGGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGATTCGCGAC
ATCGTTGACGGCATTAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATATCGTGGATGCGACCTGCTGGTTCAGCGA
AGAATCCAACGATGCGGAAACCCTCAAGGCCGGAAAACTGTATATCGACTACGACTATACCCCGGTGCCTCCTCTCGAAA
ACCTGACCCTGCGCCAGCGTATCACCGATAAATATCTGGCAAATCTGGTCACCTCGGTTAACAGCAATTAA

Protein sequence :
MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAESFPLNKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPV
TVVVRVEDGTGDDEETKLAQTVSNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFG
YISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVSSTTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGIS
ASVFWDLQESGTDADLLNESGVTTLIRRDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRD
IVDGINAKFRELKTNGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTSVNSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 5e-122 68
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 5e-122 68
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 2e-119 66