|
Name : LY180_10195 (LY180_10195) Accession : YP_008565138.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Virulence Product : transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 2127945 - 2128664 bp Length : 720 bp Strand : - Note : induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistanc DNA sequence : ATGAACCAGGCTGTTTCTATAACATATGATTTATGGCATATTATTTTCATGAAGATTTTACTTATTGAAGATAATCAAAG GACCCAGGAGTGGGTAACGCAGGGGCTTTCCGAAGCGGGTTATGTCATTGATGCCGTTTCTGATGGCAGAGATGGGCTTT ATCTTGCGCTGAAGGATGATTATGCATTGATCATTCTGGATATTATGCTTCCGGGTATGGATGGCTGGCAGATCTTACAA ACGTTAAGAACAGCAAAGCAAACCCCTGTTATTTGCCTTACTGCAAGGGATTCTGTCGATGACAGAGTCAGAGGGCTGGA CAGTGGAGCAAATGATTATCTGGTAAAACCTTTTTCATTTTCTGAGTTGCTGGCAAGGGTTCGGGCACAATTAAGGCAAC ATCACGCTTTGAATTCAACATTAGAAATCAGTGGCTTAAGAATGGACTCTGTAAGTCAAAGTGTGAGCAGGGACAATATC AGTATTACACTGACGCGCAAGGAGTTTCAGTTACTTTGGCTACTGGCCTCCAGAGCTGGCGAAATTATACCCAGAACGGT TATTGCGAGTGAAATTTGGGGAATCAACTTTGATAGTGATACCAATACGGTGGATGTCGCCATTCGCAGGCTCCGCGCAA AAGTTGATGATCCTTTTCCTGAAAAGCTAATCGCCACAATCCGGGGGATGGGCTATTCATTCGTAGCGGTAAAAAAATAA Protein sequence : MNQAVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQ TLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNI SITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-80 | 77 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 4e-82 | 74 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0125 | Protein | 1e-58 | 57 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0197 | Protein | 7e-56 | 56 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0083 | Protein | 3e-54 | 54 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0308 | Protein | 5e-52 | 53 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0111 | Protein | 1e-55 | 52 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0638 | Protein | 8e-49 | 52 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | BAC0347 | Protein | 6e-50 | 49 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_010079.5776364.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_002952.2859858.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_007622.3794948.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | AE015929.1.gene1106. | Protein | 3e-33 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_003923.1003417.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_013450.8614146.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_002951.3238224.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_007793.3914065.p0 | Protein | 2e-38 | 42 |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | NC_002758.1121390.p0 | Protein | 2e-38 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LY180_10195 | YP_008565138.1 | transcriptional regulator | VFG0596 | Protein | 8e-81 | 77 |
