Gene Information

Name : hemC (N135_00594)
Accession : YP_008561918.1
Strain : jejuni jejuni 00-2425
Genome accession: NC_022362
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 546213 - 547136 bp
Length : 924 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCTTATTATTGCAACAAGAAAAAGTCAATTAGCTCTTTGGCAAAGTGAACATGTAGCCCAAATTTTAAAAAATAC
ACATCAAATTGAAGTGCTTTTAGAAGGTTTTAAAACAAAAGGCGATGTTTTGCTTGATTCTCCTTTGGCAAAAATTGGTG
GTAAAGGACTTTTTACAAAAGAACTTGAAGAAAGTATGTTAAGAAAAGAAGCACATTTAGCAGTGCATAGTTTAAAAGAT
GTGCCTAGTTTTTTTCCTCAAGGTTTAGTTTTGGCAGCGGTAAGCAAAAGAGAGCAAAGCAATGATGCTATGCTAAGTCA
AAATTATAAAGATTTTCTTTCTTTACCAAAAGGTGCAAAAATAGGCACTACTAGTCTTAGACGCAAGATGCAGCTTTTAT
TATTAAGACCTGATTTAGAGATTATTTCTTTGCGTGGTAATGTCAATTCTCGTATAGAGAAATTAAAAAATAATGATTTT
GATGCGATTATTTTGGCAATGGCGGGAATTAAACGCTTAAACTTAGATAAGCAAGTGAATTTTGTTTATGAATTTAGCAA
AGATGAGCTTATTCCTGCGGCTTCTCAAGGAGCTTTAGGTATAGAAAGCATAAATGATGAAAAAATTTTAGAACTTTTAA
AATGTTTAAATGATGAAAATGCTTTGATTGAAACAAGCATTGAAAGAGAATTTATTGCTACTTTAGAAGGAGGTTGTCAA
GTTCCTATAGGTATTAACGCAGAACTCTTAGGAGATGAAATTTGTATGCGTGCGGTACTTGGACTACCCGATGGAAGTGA
AATTTTAAAAGATAAGAGAATGATTAAAAAGAATGATTTTAAAGGTTTTGGAGAGAGTTTGGCTAAGGAGTTTATTGCTA
AAGGTGCTAAAGAACTTTTAAAAAAAGCTGAGAGTATGATATGA

Protein sequence :
MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKD
VPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDF
DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLNDENALIETSIEREFIATLEGGCQ
VPIGINAELLGDEICMRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAKELLKKAESMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-54 48
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-54 48