Gene Information

Name : peb3 (N135_00279)
Accession : YP_008561623.1
Strain : jejuni jejuni 00-2425
Genome accession: NC_022362
Putative virulence/resistance : Virulence
Product : major antigenic peptide PEB3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 266970 - 267722 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATTATTACTTTATTTGGTGCATGTGCCTTAGCTTTTAGTATGGCAAATGCAGATGTAAACCTTTACGGACC
AGGTGGCCCACACACGGCCTTAAAAGATATAGCAAACAAATATAGCGAAAAAACAGGCGTTAAAGTAAATGTAAATTTTG
GCCCTCAAGCGACTTGGTTTGAAAAGGCTAAAAAAGATGCAGATATTTTATTTGGCGCTTCAGATCAATCGGCTTTAGCT
ATAGCGAGTGATTTTGGAAAAGATTTTAATGTGAGTAAAATCAAGCCTTTATATTTTAGAGAAGCCATCATACTTACTCA
AAAAGGCAATCCTTTAAAAATCAAAGGTTTAAAAGATTTGGCTAATAAAAAAGTAAGAATCGTTGTGCCTGAAGGTGCTG
GAAAGAGCAATACTTCTGGAACTGGAGTTTGGGAAGATATGATAGGTAGAACTCAAGATATAAAAACCATACAAAATTTT
AGAAACAATATCGTGGCCTTTGTTCCAAATAGTGGAAGTGCAAGAAAGCTTTTCGCACAAGATCAAGCCGATGCTTGGAT
CACTTGGATTGACTGGTCAAAAAGCAATCCTGACATAGGAACTGCCGTAGCTATAGAAAAAGATTTGGTTGTTTATAGAA
CTTTTAATGTGATAGCTAAAGAAGGTGCGAGCAAAGAAACACAAGATTTTATTGCTTATTTAAGTTCTAAGGAAGCTAAA
GAAATTTTTAAAAAATACGGCTGGAGAGAATAA

Protein sequence : 
MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEKTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALA
IASDFGKDFNVSKIKPLYFREAIILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSKEAK
EIFKKYGWRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAA82706.1 AcfC Virulence VPI Protein 1e-57 54
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
peb3 YP_008561623.1 major antigenic peptide PEB3 VFG0105 Protein 9e-58 54
peb3 YP_008561623.1 major antigenic peptide PEB3 VFG0839 Protein 7e-58 52