Gene Information

Name : kpsF (N135_01535)
Accession : YP_008562802.1
Strain : jejuni jejuni 00-2425
Genome accession: NC_022362
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460194 - 1461141 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACTCTTGAAATAGCCAAAGAAGTTTTTGAAAAAGAAGCGCAAGCTATTTTGGATTTGGCTACAAATTTAGATGA
AAATTTTAATCAAGCTGTAAATTTGATGTTAAATACCAAAGGGCGTTGCATAGTTAGTGGTATGGGTAAATCAGGTCATA
TAGGCGCTAAGATAGCAGCTACTTTAGCAAGCACAGGAACACCAAGCTTTTTTATCCATCCAGGAGAGGCTTTGCATGGA
GATCTTGGAATGTTAACTTCCGAAGATGTTTTAATTGCTATTTCAAATTCAGGAGAAACTGAAGAAATTTTAAAAATCAT
TCCTGCTATAAAAAAGCGTGAAATTCCACTTATAGTAATGTGTGGTAAAAAAAATTCTACCCTTGTAAAGCAAGGCGATA
TATTTTTAAATATAGCCGTGGAAAAGGAAGCTTGTCCTTTGCAGCTTGCTCCTATGTCTTCGACAACAGCAACTTTAGTT
ATGGGGGATGCTTTAGCGGCTGCTTTGATGAAGGTAAGAAATTTCAAGCCTGATGATTTTGCCCTTTTTCATCCAGGGGG
AAGTTTGGGACGTAAGCTTTTAACCAAGGTAAAAGATCTTATGGTTTCAAGTAACCTTCCTATAGTGCATCCTGATACCG
AATTTAACGATCTTGTTGATGTGATGACTAGTGGAAAACTAGGACTTTGTGTGGTGCTTGAAAATGAAAAATTAGTGGGT
ATTATCACTGACGGGGATTTGCGTCGTGCTTTAAAAGCAAGCGATAAACCAAGGTTTGATTTTAAGGCCAAAGAAATCAT
GAGTATAAATCCTAAAGTAGTCGATGCTGATGCTATGGCAAGTGAAGCAGAAGGGATCATGTTAAAACATAAAATCAAAG
AAATTATAGTAGGAAAAGAAGAAAAAGTTGTAGGTATTATCCAGCTTTATGCCATAGGAAATGTTTAA

Protein sequence : 
MNTLEIAKEVFEKEAQAILDLATNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG
DLGMLTSEDVLIAISNSGETEEILKIIPAIKKREIPLIVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLV
MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
IITDGDLRRALKASDKPRFDFKAKEIMSINPKVVDADAMASEAEGIMLKHKIKEIIVGKEEKVVGIIQLYAIGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-56 48
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-57 48
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 7e-57 48