Gene Information

Name : N646_3460 (N646_3460)
Accession : YP_008548338.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 422015 - 422674 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGTTTTCGACACGTGGTTAAAAGGTCAAGTCATTAAAGATCACATCACTAATCCCAATATCATCGTTGGCGATTA
CAGCTATTACTCGGGCTTCTATCATCAAAAAAGCTTCGAAGAGCAAGCGGTACGCTACTTGTTGGGTGACCCCGTCACAC
TTCAAGAATGGCAAAGTAGAGAACCCGATAGCATCGACAAATTAATCGTTGGCAAGTTTTGTTCCATCGCTTCTGGAGCC
ACCTTCATGATGGCAGGAAACCAAGGTCATCGCATTGACTGGATTTCGACCTTCCCCTTCTCTCCTGAAGAATTTGGAGA
AGGCGTACAAGACGGTTTCGAGCGTGCCGGAGACACAGTGGTGGGAAATGATGTTTGGATTGGCGGTGAGGCGATGATCA
TGCCCGGAGTAAACATCGGCGATGGAGCCGTCATCGGAGCACGCGCCGTAGTGACGAAAGACGTGCAACCTTATTCTGTG
GTGGTTGGAAACAACCAAGTCGTACGTCAACGATTCAGCGATAAAGAGATTGAAACTCTACTCAATATCCAATGGTGGAA
CTGGCCAATAGAACACATTAAACAAGCAATGAAAGTAATGTGTAGCAGCCAAGTGGGTGCGCTTGCGGACTACTATCAAG
AGCACATTGTCGATTTGTAG

Protein sequence : 
MSVFDTWLKGQVIKDHITNPNIIVGDYSYYSGFYHQKSFEEQAVRYLLGDPVTLQEWQSREPDSIDKLIVGKFCSIASGA
TFMMAGNQGHRIDWISTFPFSPEEFGEGVQDGFERAGDTVVGNDVWIGGEAMIMPGVNIGDGAVIGARAVVTKDVQPYSV
VVGNNQVVRQRFSDKEIETLLNIQWWNWPIEHIKQAMKVMCSSQVGALADYYQEHIVDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-41 53
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-40 52
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-40 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-40 54
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 4e-42 53
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 6e-41 52
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 6e-41 52
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 1e-38 49
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 8e-44 44
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 3e-24 44
N646_3460 YP_008548338.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 5e-28 41