Gene Information

Name : N646_3387 (N646_3387)
Accession : YP_008548265.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Virulence
Product : ATP-binding component of citrate-dependent iron(III) transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 343704 - 344468 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGTTACGAACGCAGAACTTATCCGTCGCGTACGGCAAACAGACCATCATTCCGGATCTCTCTTTGTCGATTCCTCAAGG
TAAAATTACCGCGCTTGTTGGCCCAAATGGTTGCGGTAAGTCGACACTATTAAAAACCTTGGTACGCATCAATAAACCAG
CTTCTGGCCAAGTGTTGTATGGCGACAAACCACTAAGCAGCTACGGTGATAAACGCTTGGCGCGTTCGTTGTCTTTGCTG
CCGCAGATTCTTGTCAGTCCTGAAGGTATTACCGTCAGAAAACTGGTCGAATATGGCCGCTCGCCTTATCTCTCTCATTG
GGGCCGGTTAAGTCAACAAGACAAGACCTTAGTCGAGCAAGCAATGCAAGATACTGGCGTGATTGAGTTTGCTGACAAGC
CAGTTGAATCGCTGTCTGGCGGTCAAAGGCAAAGAGCGTGGATTGCGATGGTAATGGCGCAAGATACCGACGTAGTGATG
CTTGATGAGCCAACCACTTACTTGGATCTTTCTCACCAAGTTGAGCTGATGAAACTCATGAGGCAGATGAACGACAAAGG
CAAAACTGTGGTGGTAGTACTGCACGATCTAAACCAAGCGTGCCGTTATTGCGATCATTTGGTGGTGTTGGAAAAAGGTC
AGTTAGTCACGCAGGGAACACCGCAAGAGGTACTGACAGAAGGTATGTTGGCATCGGTGTTTGATTTACAAGCGAGAGTA
TTTAACGACCCAATCTCAGGCACGCCGATGTGTGTGGCGGTGTAG

Protein sequence :
MLRTQNLSVAYGKQTIIPDLSLSIPQGKITALVGPNGCGKSTLLKTLVRINKPASGQVLYGDKPLSSYGDKRLARSLSLL
PQILVSPEGITVRKLVEYGRSPYLSHWGRLSQQDKTLVEQAMQDTGVIEFADKPVESLSGGQRQRAWIAMVMAQDTDVVM
LDEPTTYLDLSHQVELMKLMRQMNDKGKTVVVVLHDLNQACRYCDHLVVLEKGQLVTQGTPQEVLTEGMLASVFDLQARV
FNDPISGTPMCVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-72 58
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-55 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-56 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-56 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-55 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_3387 YP_008548265.1 ATP-binding component of citrate-dependent iron(III) transport protein BAC0164 Protein 4e-72 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_3387 YP_008548265.1 ATP-binding component of citrate-dependent iron(III) transport protein VFG1042 Protein 4e-72 58
N646_3387 YP_008548265.1 ATP-binding component of citrate-dependent iron(III) transport protein VFG0925 Protein 1e-60 47