Gene Information

Name : N646_4305 (N646_4305)
Accession : YP_008549182.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1340771 - 1341340 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence : 
GTGGAGCGTATTGCAGACGTAGAGCCACAATGGAAAAAAGCTGACTTGGTAATTCTCGATCGCCAACTCCCAGATGGTGA
CTCTGTACAATGTCTCCCAGAATGGAAACAGATTAAAGACGTACCAGTTATCTTGTTAACGGCACTTGTTACCGTAAAAG
ATAAAGTTGCAGGCCTTGATTCCGGCGCGAACGACTACTTAACAAAGCCTTTTGCTGAGGCGGAGCTTTTTGCGAGAATC
CGTGCACAGCTACGAGCACCGGATTCAGCAGAACAAAGCAACGCTGATAAAGTGATTACAAAAGACTTAGAGATTGACCG
CTCGACTCGTGAAGTGACTTATAAAGACGAGCTAATTACGCTTACTCGAACAGAGTTTGATTTGCTGCTATTTTTGGCGT
CAAACTTAGGTCGCGTGTTTACTCGTGATGAGCTACTTGACCACGTTTGGGGTTACAATCACTTCCCGACAACACGTACG
GTTGATACACATGTACTACAGCTTCGTCAAAAACTGCCAGGACTGGAAATTGAAACACTTCGTGGTGTTGGCTACAAGAT
GAAAGCATAA

Protein sequence : 
MERIADVEPQWKKADLVILDRQLPDGDSVQCLPEWKQIKDVPVILLTALVTVKDKVAGLDSGANDYLTKPFAEAELFARI
RAQLRAPDSAEQSNADKVITKDLEIDRSTREVTYKDELITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFPTTRT
VDTHVLQLRQKLPGLEIETLRGVGYKMKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_4305 YP_008549182.1 transcriptional regulator NC_003923.1003417.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_013450.8614146.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_002951.3238224.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_007793.3914065.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_002758.1121390.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_010079.5776364.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_002952.2859858.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator NC_007622.3794948.p0 Protein 1e-24 44
N646_4305 YP_008549182.1 transcriptional regulator HE999704.1.gene2815. Protein 5e-30 43
N646_4305 YP_008549182.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-20 42
N646_4305 YP_008549182.1 transcriptional regulator BAC0111 Protein 6e-20 42
N646_4305 YP_008549182.1 transcriptional regulator CP004022.1.gene3215. Protein 7e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_4305 YP_008549182.1 transcriptional regulator VFG0596 Protein 6e-21 42
N646_4305 YP_008549182.1 transcriptional regulator VFG1390 Protein 3e-24 41