Gene Information

Name : N646_4133 (N646_4133)
Accession : YP_008549010.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Virulence
Product : accessory colonization factor AcfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1161142 - 1161789 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence : 
ATGAACAAAACCATTCTTGCGTTACTCGTTACCTGCTCAGTTTCGGTATCTGCGGCTCCTTATGTAGGTCTGGAATATGG
ACTAGGCACCACTGACCATGACTTGGAACCTCACTTTTCATCTGAAAATGTAACGCTTAATCCAGAACTTGAGGGTGGTA
TCTTCTCAGGTTTTATCGGTTACTCGTTTAATGACAATTGGGCAATTGAGCTAGGTTACAGCCAGTTTGACCTTGATGAC
GGCCGTTCTAAGAACCTTGGTATCAAGACAATTGATGGCAAAGATTACCATCATGAAATGGATTGGGATGCCTCTATCAC
AGCCAAACAAGTCTCGCTAGCACCAGTGTTTAGCTATGCATTAAGTGATAAATGGACAACAAAATTCAAAGCGGGTTTAA
CTTACACACAATACGACGCCAAGGTTGCTCAACATCAAGAATATGAGCTTGTCGCGAATGACGATGTGGAAATAAGCAAC
ACGCTTTTCCATAGCTCGGAGAAAAGCAACGAGTTAGGCGCAATGTTCTCTGTGGGCGCGGAATACCAAGTGTTGCCAAA
GCTCACCATTGGCGCAAACGCTAAATACCAACTAGACAGCTACGCAAACACTGCATCCTTTAACGTAGGCACAACTTATT
ACTTCTAA

Protein sequence : 
MNKTILALLVTCSVSVSAAPYVGLEYGLGTTDHDLEPHFSSENVTLNPELEGGIFSGFIGYSFNDNWAIELGYSQFDLDD
GRSKNLGIKTIDGKDYHHEMDWDASITAKQVSLAPVFSYALSDKWTTKFKAGLTYTQYDAKVAQHQEYELVANDDVEISN
TLFHSSEKSNELGAMFSVGAEYQVLPKLTIGANAKYQLDSYANTASFNVGTTYYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfA ACK75654.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
acfA ACK75663.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
acfA ACK75669.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
VC0844 NP_230492.1 accessory colonization factor AcfA Virulence VPI-1 Protein 1e-38 41
acfA AAA69687.1 accessory colonization factor Virulence VPI Protein 8e-39 41
acfA YP_001216324.1 accessory colonization factor AcfA Virulence VPI-1 Protein 1e-38 41
acfA AAA82709.1 AcfA Virulence VPI Protein 8e-39 41
acfA ACK75648.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
acfA ACK75657.1 accessory colonization factor AcfA Virulence VPI Protein 5e-39 41
acfA AAK20771.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
acfA ACK75666.1 accessory colonization factor AcfA Virulence VPI Protein 5e-39 41
acfA AAK20801.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41
acfA ACK75651.1 accessory colonization factor AcfA Virulence VPI Protein 8e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_4133 YP_008549010.1 accessory colonization factor AcfA VFG0103 Protein 4e-39 41