Gene Information

Name : SCD_n03123 (SCD_n03123)
Accession : YP_008547954.1
Strain :
Genome accession: NC_022358
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 85284 - 86267 bp
Length : 984 bp
Strand : +
Note : K03733

DNA sequence :
ATGAATCATGAATTGCCGCAACTATCATCGACCTCTGGTGCTTTAACTCAGGAATGCGTGCTGACTGCCACTCAATTCCA
TCAGTTGGCGGAAGTACCGCCGGCGATCACCTGGTTTGCCAATATCGACAACCCGCAAACCCGCCGGGCTTACCAATGCG
ATTTGCAGGCCTTCATGGTTTTTACCGGGATCAGCCAGCCTGATCAATTTCGTAGTATCACCCGCGCGCACCTGCTTGCT
TGGCGGAAAGATCTGGAATCGCGGGCCCTGTCAGGGGCGACCATCCGGCGCAAGCTGGCGGCACTGTCTTCTTTGTTCGA
CTATCTGTGTGAATCGAATGCGGTGACCAGTAACCCGGTCAAGGGCGTGAAGCGCCCGAAGATGGAAAGCACTGAAGGAA
AAACTCCAGCAATTGGTAATCATCAGGCACGAGCCCTACTTGATGCACCGGATACCCATACGTTACTGGGACAGCGTGAC
CGCGCGATTTTATCTACTCTGTTGTATCACGGCTTACGCCGGGCTGAGCTGTGCACGTTGCTGGTGGGCGATCTGCAGCA
GCGGCGTGGCGTGATGCATTTACGCGTTCACGGCAAGGGTGGGAAGTTGCGTTATTTGCCACTGCATCCAGGGACAGCCG
GACTCATTGATGCTTATCTGCAAGCGGCTGGCCATACCGATGATGCGCAAGGCGCCCTGTTCCGTCCGATCAGGAACACT
ATGCATAGTGACAAGCGGGCTTCGATCACTGCCGATGGGATCTACAAGATGCTGGCCGGCTATGCTGCCGGACTGAGTAT
GGATGTAGCCGGGTTCGGGCCGCATGCGCTACGTGCGACGGCGGCGACCAATGCACTGGAACACGAAGCGGATATTGCCA
AGGTCCAGGAGTGGCTGGGACATGCCAACATTTCGACGACGCGCATTTACGATCGGCGAAAGATGCGGCCGGAGGATAGT
CCGACTTTCAGGGTGGCTTATTGA

Protein sequence :
MNHELPQLSSTSGALTQECVLTATQFHQLAEVPPAITWFANIDNPQTRRAYQCDLQAFMVFTGISQPDQFRSITRAHLLA
WRKDLESRALSGATIRRKLAALSSLFDYLCESNAVTSNPVKGVKRPKMESTEGKTPAIGNHQARALLDAPDTHTLLGQRD
RAILSTLLYHGLRRAELCTLLVGDLQQRRGVMHLRVHGKGGKLRYLPLHPGTAGLIDAYLQAAGHTDDAQGALFRPIRNT
MHSDKRASITADGIYKMLAGYAAGLSMDVAGFGPHALRATAATNALEHEADIAKVQEWLGHANISTTRIYDRRKMRPEDS
PTFRVAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xerD CAI36095.1 XerD-like site-specific recombinase Not tested PPHGI-1 Protein 3e-95 64