Gene Information

Name : SCD_n03049 (SCD_n03049)
Accession : YP_008547880.1
Strain :
Genome accession: NC_022358
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13870 - 16176 bp
Length : 2307 bp
Strand : -
Note : K06959

DNA sequence :
ATGATTACCAGCATCACCCAACGCATCGCCCAGGAACTCTCCGTTCATCCCAACCAGGTTCAAGCCGCTGTCGATCTGCT
CGACGAGGGTGCCACGGTGCCATTTATTTCGCGCTACCGTAAGGAGGCCACTGGCAGTCTGGACGATACCCAGATGCGTA
ATCTGGAGGAGCGGCTGCGCTATCTGCGCGAGCTGGAGGATAGACGCTCTGCGATTCTCAAGAGCGTCACCGATCAAGGC
AAGCTCACCCCTGAGCTGGAAAAGGACCTCCTTGGTGCCGACAGCAAAGTCCGGCTGGAAGACCTTTATTTGCCTTATAA
GCCTAAACGCCGCACCAAAGCGATGATCGCCCGCGAGGCAGGTCTGGAGCCGCTGGCAGAGGCGCTGCTAGTCAATTTCA
TGCTGGTTCCGGAGGAAGCTGCGCTGGCCTACGTTGATGCCGGCAAAGGTGTGGCAGATGTCAAAGCCGCACTGGAAGGC
GCACGCCATATTCTGATGGAAAAGTTTTCTGAAGACGCTGAATTGATCGGCAGATTGCGCGAACATCTATGGGATAACGC
CATACTCAAATCCGCCGTAGTGGAAGGCAAGGAGACCGAAGGCGCGAAGTTTCGCGACTATTTCGATTCCCGTGAACCGT
TGAAACGCGTGCCTTCGCACCGTGCGCTGGCACAACTGCGCGGCAGCAACGAGGGTTTTCTGTTTCGCACGCTGGTGCTG
GAAGAAGACGAACAGGCACAGGGACGCACCGGACCACCCAACCGCTGTGAACAGATGATCGCACGGCGCTTCAATATTGC
GGATCAGGGCCGACCCGCTGACAAGTGGCTGAATGAAACTGTGCGCTGGTCATGGCGGGTGAAGATTTTTCTGCACCTTG
ATCTGGAGTTGATCAACCGATTGCGAGAAACTGCCGAGACCGAAGCCATTCATGTCTTTGCGCGTAATCTGCATGACTTG
TTGCTGGCGGCTCCAGCTGGACCGCGGACTACCATCGGCCTTGATCCCGGGTTGCGTAGCGGGGTGAAAATTGCAGTGGT
GGACACAACCGGCAAGCTGGTCGATTTTGCGACGATTTATCCGCATGAACCCAAACGCGAGTGGGATAAATCTGTAGCCG
TGATTGCAGCACTGGCCACCAAGCACCATGCCGAACTCATCAGCATCGGTAACGGTACTGCCTCACGCGAAACCGACAAG
CTGGCGACCGAGGTGATAAAACGTTTTCCTGAGCTAAAATTACAAAAACTGGTGGTGTCCGAAGCGGGCGCCTCGGTGTA
TTCCGCTTCGGAACTAGCCGCACGTGAGTTTCCCGATGTCGACGTGACCATCCGTGGTGCGGTATCCATCGCTCGTCGCC
TGCAAGACCCCCTCGCGGAACTGGTGAAAATTGACCCCAAGGCAATTGGTGTGGGCCAGTACCAGCATGATGTCAATCAG
TACGAACTGGCACGCGGCCTGGATGCTGTCGTGGAGGACTGCGTCAACAAGGTAGGCGTAGACGTGAATACCGCTTCAGC
GCCTTTGTTGGCAAGAATTTCCGGGCTGAACGCAACCCTTGCGGGCAATATCGTCAGCTATCGTGATGAGCACGGCGCTT
TCCTCAACCGCACAGCTTTGAAGAAAGTCCCGCGCCTCGGCGACAAGACCTTTGAACAGGCCGCAGGGTTTTTGCGCATC
ATGAACGGCAACAACCCGCTCGATGCTTCTGCGGTGCACCCGGAAGCCTATCCGCTGGTGGAAAGCATCGTTGCGCGTCT
CAACGTCAGCATCAAGTCGCTGATCGGTGACAGTACAACACTGCGCCGCCTGACGCCGACAGAATTCACGAATGATAAAT
TCGGACTGCCAACGGTCAAGGATATCCTGGCTGAACTGGAAAAGCCCGGGCGCGATCCGCGTCCGGAATTCAGGACGGCG
GCTTTCCGGGACGGCGTGGAGGAGCTCAAGGATTTACAGCCCGGCATGATCCTCGAAGGGGTGGTGACCAATGTGGCCAA
CTTTGGGGCTTTTGTGGATATCGGGGTACATCAGGATGGGTTGGTCCACATCTCGGCGCTGGCGGAGAAGTTCGTCAAGG
ATCCACATACCATCGTCAAGGCGGGAGATGTGGTACGGGTCAAGGTCGTAGAGATCGATCCTGTTCGCCGACGCATTGCG
CTGACCATGCGTCTCAGTGACGAGGCGGCACCAGCGGCATCAACGATACGCAGCGAACCTGCACGCAAACCCCAGGCCAA
GCGCGAATCACCGCCTCAGGTAGGTGGTGCGATGGCCGCTGCTCTGGCGAAGTTGCGTGGGGGATGA

Protein sequence :
MITSITQRIAQELSVHPNQVQAAVDLLDEGATVPFISRYRKEATGSLDDTQMRNLEERLRYLRELEDRRSAILKSVTDQG
KLTPELEKDLLGADSKVRLEDLYLPYKPKRRTKAMIAREAGLEPLAEALLVNFMLVPEEAALAYVDAGKGVADVKAALEG
ARHILMEKFSEDAELIGRLREHLWDNAILKSAVVEGKETEGAKFRDYFDSREPLKRVPSHRALAQLRGSNEGFLFRTLVL
EEDEQAQGRTGPPNRCEQMIARRFNIADQGRPADKWLNETVRWSWRVKIFLHLDLELINRLRETAETEAIHVFARNLHDL
LLAAPAGPRTTIGLDPGLRSGVKIAVVDTTGKLVDFATIYPHEPKREWDKSVAVIAALATKHHAELISIGNGTASRETDK
LATEVIKRFPELKLQKLVVSEAGASVYSASELAAREFPDVDVTIRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQ
YELARGLDAVVEDCVNKVGVDVNTASAPLLARISGLNATLAGNIVSYRDEHGAFLNRTALKKVPRLGDKTFEQAAGFLRI
MNGNNPLDASAVHPEAYPLVESIVARLNVSIKSLIGDSTTLRRLTPTEFTNDKFGLPTVKDILAELEKPGRDPRPEFRTA
AFRDGVEELKDLQPGMILEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPHTIVKAGDVVRVKVVEIDPVRRRIA
LTMRLSDEAAPAASTIRSEPARKPQAKRESPPQVGGAMAAALAKLRGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63