Gene Information

Name : mmfR (SCD_n00869)
Accession : YP_008545742.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 871944 - 872606 bp
Length : 663 bp
Strand : +
Note : K12128

DNA sequence : 
ATGCGAATTTTGCTAGTCGAAGATGACCCGATGATCGGTGAAGCGGTGTCAGTAGCCCTCAAGGATGCTGCCTATGCCGT
GGATTGGGTGCTTGATGGTGTGGCGGCCGACACCGTTCTGCGCGACGGCGAGCATCAGGCCGTTCTGCTCGACCTAGGGC
TGCCCAAGCGTGACGGACTCGAAGTGCTGCGGCGATTGCGGCAGGGCGGCAATGGAGTACCGGTCATCGTTATTACCGCC
CGCGATGGCGTAGATGACCGGATCAAGGGACTCGATTTCGGCGCCGACGATTACCTCATGAAGCCGTTCGACCTGAATGA
ATTACTGGCCCGGCTACGTGCGGTTATCCGCCGCCAAGGCGGGCAGGCCGCGCCCCTGCTGAGCAACGGCAAACTCAGTC
TAGATCCTGCCACGCGCGAGGCACGCTGCGGCGAAGCCGTGGAACTGCTCAGCGCACGCGAGTTTGCCCTCTTGCATGCG
CTGCTCCTTCGCCCCGGTACAATCCTGGGCCGGGCCGAGTTGGAGGAGCGCATTTATGGCTGGAATGAAGAGGTCGAAAG
CAATGCCGTGGATTTCCTGATCCATGGTATCCGCAAAAAGCTCGGCGCCGATGTCATCAAGAACATACGCGGCGCCGGCT
GGATGGTGGATCGAGCGACATGA

Protein sequence : 
MRILLVEDDPMIGEAVSVALKDAAYAVDWVLDGVAADTVLRDGEHQAVLLDLGLPKRDGLEVLRRLRQGGNGVPVIVITA
RDGVDDRIKGLDFGADDYLMKPFDLNELLARLRAVIRRQGGQAAPLLSNGKLSLDPATREARCGEAVELLSAREFALLHA
LLLRPGTILGRAELEERIYGWNEEVESNAVDFLIHGIRKKLGADVIKNIRGAGWMVDRAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mmfR YP_008545742.1 two component transcriptional regulator, winged helix family BAC0487 Protein 9e-35 41
mmfR YP_008545742.1 two component transcriptional regulator, winged helix family BAC0197 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mmfR YP_008545742.1 two component transcriptional regulator, winged helix family VFG0473 Protein 2e-39 43