Gene Information

Name : SCD_n03002 (SCD_n03002)
Accession : YP_008547833.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3091924 - 3092595 bp
Length : 672 bp
Strand : +
Note : K02003

DNA sequence : 
GTGATCGTCGAAGCTCAAGCAGTCGGCAAAGAATATGCCCTTGGCAAACAAACTGTTACGGCATTGCGCAACATTTCCCT
TTCTATCCATAAAGGCGAATTCATGGCGCTAGCGGGGCCGTCGGGGAGCGGCAAGTCGACCCTGCTCAATCTGATTGGCT
GTATTGACACGCCGACCACGGGAACCATCCTGATTGGAGGGCAGAATATCAGCGGCAAAACACCCGATGAACTGGCTGAT
CTGCGACTAAACACGCTGGGCTTTGTCTTCCAGACCTTCAATCTGCTGCCGGTATTGTCAGCTTGGGAAAATGTCGAATA
TCCCTTGTTGCAGCAACCTAAGGTAGCCAAGAAAACGCGGCAGGAACGCGTCCAGCATTATCTGAAGGTGGTTGGCCTGG
AACCCTATGCGCACCACCGCCCCAATGAATTGAGCGGTGGTCAACGCCAGCGAGTGGCGATCGCGCGTGCCCTCGCCACC
CGTCCAAGCATCGTCCTGGCAGACGAACCGACTGCCAACCTTGATCACAAAACCGGCGAAGGTATTCTCAGGCTGATGAA
AGACCTCAACCAGGAAGAAGGCACGACCTTCATTTTCTCCACCCATGACGCGCGCGTCATGGAGATGGCCGACCGGGTGA
TTGAACTGGCCGATGGCCAGATAATGGAATAG

Protein sequence : 
MIVEAQAVGKEYALGKQTVTALRNISLSIHKGEFMALAGPSGSGKSTLLNLIGCIDTPTTGTILIGGQNISGKTPDELAD
LRLNTLGFVFQTFNLLPVLSAWENVEYPLLQQPKVAKKTRQERVQHYLKVVGLEPYAHHRPNELSGGQRQRVAIARALAT
RPSIVLADEPTANLDHKTGEGILRLMKDLNQEEGTTFIFSTHDARVMEMADRVIELADGQIME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-30 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCD_n03002 YP_008547833.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-41 50
SCD_n03002 YP_008547833.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-37 49
SCD_n03002 YP_008547833.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-40 43
SCD_n03002 YP_008547833.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-32 41